Panicum virgatum (switchgrass): 120698448
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Entry
120698448 CDS
T07260
Name
(RefSeq) heat shock 70 kDa protein 4
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03040
Spliceosome
pvir04141
Protein processing in endoplasmic reticulum
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120698448
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120698448
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120698448
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120698448
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120698448
03009 Ribosome biogenesis [BR:
pvir03009
]
120698448
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120698448
04131 Membrane trafficking [BR:
pvir04131
]
120698448
03051 Proteasome [BR:
pvir03051
]
120698448
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120698448
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120698448
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
120698448
Spliceosome [BR:
pvir03041
]
Complex B
Other components
Prp19 complex
120698448
Complex C
Prp19-CDC5 complex
120698448
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
120698448
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP70 / DNAK
120698448
Membrane trafficking [BR:
pvir04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
120698448
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
120698448
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
120698448
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
120698448
Exosome [BR:
pvir04147
]
Exosomal proteins
Proteins found in most exosomes
120698448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Radial_spoke_3
Motif
Other DBs
NCBI-GeneID:
120698448
NCBI-ProteinID:
XP_039838001
LinkDB
All DBs
Position
3K:23048528..23051527
Genome browser
AA seq
651 aa
AA seq
DB search
MAKGEGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAK
NQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVVAGPGDKPMIVVNYKGEEKQFS
AEEISSMVLTKMKEIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINE
PTAAAIAYGLDKKASSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDF
DNRMVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDF
YTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDF
FNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVL
IPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQ
ITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHK
KKVDAKNALENYAYNMRNTIKDDKIASKLGADDKKRIEEAIDGAISWLDSNQLAEADEFE
DKMKELEGICNPIIAKMYQGAGADMGGAAGMDEDVPAGGSGGAGPKIEEVD
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagggggagggggaggggccggcgatcgggatcgacctggggacgacctactcg
tgcgtcggcgtgtggcagcacgaccgcgtcgagatcatcgccaacgaccaggggaaccgc
accacgccgtcctacgtcgccttcaccgacaccgagcggctcatcggcgacgccgccaag
aaccaggtcgccatgaaccccaccaacaccgtcttcgacgcgaagcggttgatcggcagg
aggttctccgacccgtccgtgcagagtgacatgaagctatggccgttcaaggtcgtggct
ggccctggcgacaagccgatgatcgtggtcaactacaagggcgaggagaagcagttctct
gctgaggagatctcctccatggtgctgaccaagatgaaggagatcgctgaggcatacctc
ggctccaccatcaagaacgccgtggtcaccgtgcctgcctacttcaacgactcccagagg
caggccaccaaggacgccggcgtcatctccggcctcaacgtgatgcgcatcatcaacgag
cccaccgccgcggccatcgcctacgggctcgacaagaaggccagcagctccggcgagaag
aacgtgctcatcttcgacctcggcggcggcaccttcgatgtgtctctgctgaccatcgag
gagggcatcttcgaggtcaaggccaccgccggtgacacccatctgggtggcgaggacttc
gacaaccgcatggtgaaccacttcgtccaggagttcaagcgcaagcacaagaaggacatc
agcggcaacccgcgcgcgctgcggcgtctgcggacggcctgcgagcgcgccaagcgcacg
ctgtcgtccaccgcgcagaccaccatcgagatcgactcgctgtacgagggcatcgacttc
tacaccaccatcacccgcgcccggttcgaggagctcaacatggacctcttccgcaagtgc
atggagcccgtggagaagtgcctccgcgacgccaagatggacaagagcaccgtgcacgac
gtcgtgctcgtgggcggctccacccgcatcccgaaagtgcagcagctgctccaggacttc
ttcaacggcaaggagctgtgcaagagcatcaaccccgacgaggccgtggcgtatggcgcc
gctgtccaggcagccatcctcagcggcgagggcaacgagaaggtgcaggacctgctcctg
ctcgacgtcacgccactgtccctcggtctggagaccgccggcggcgtcatgaccgtgctg
atcccgcgcaacaccaccatccccaccaagaaggagcaggtcttctccacctactcggac
aaccagccaggcgtgctgatccaggtgtacgagggcgagcgcgccaggaccaaggacaac
aacctcctgggcaagttcgagctgtcgggtatcccgccggcgccccgcggcgtgccccag
atcaccgtgtgcttcgacatcgacgccaacggcatcctgaacgtgtcggccgaggacaaa
acgacggggcagaagaacaagatcaccatcaccaacgacaaggggcggctgagcaaggag
gagatcgagaagatggtgcaggaggcggagaagtacaaggcggaggacgaggagcacaag
aagaaggtggacgccaagaacgcgctggagaactacgcctacaacatgcgcaacaccatc
aaggacgacaagatcgcctccaagctgggcgccgacgacaagaagcgcatcgaggaggcc
atcgacggcgccatcagctggctcgacagcaaccagctcgcggaggccgacgagttcgag
gacaagatgaaggagctggagggcatctgcaaccccatcatcgccaagatgtaccagggc
gccggcgcggacatgggcggcgcagcgggcatggacgaggacgtgccggccggcggcagc
ggcggcgctggccccaagatcgaggaggtcgactaa
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