Panicum virgatum (switchgrass): 120698480
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Entry
120698480 CDS
T07260
Name
(RefSeq) probable ribose-5-phosphate isomerase 2
KO
K01807
ribose 5-phosphate isomerase A [EC:
5.3.1.6
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00030
Pentose phosphate pathway
pvir00710
Carbon fixation by Calvin cycle
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01230
Biosynthesis of amino acids
Module
pvir_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
pvir_M00007
Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
pvir_M00165
Reductive pentose phosphate cycle (Calvin cycle)
pvir_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
120698480
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
120698480
Enzymes [BR:
pvir01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.6 ribose-5-phosphate isomerase
120698480
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GFIT
Motif
Pfam:
Rib_5-P_isom_A
DeoRC
Motif
Other DBs
NCBI-GeneID:
120698480
NCBI-ProteinID:
XP_039838042
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Position
3K:complement(23347791..23349090)
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AA seq
283 aa
AA seq
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MGSAATSPPPSMKLAQEDLKRVAAHMGDAAAASPPPVKLTQEDLKRVAAHRAVEFVEPGM
ALGLGTGSTAAHALDRLGDLIRAGALPGVAGVPTSLKTELHATRVGIPLLPLGGDRGPAR
IHLSIDGADEVDPDLNLVKGRGGSLLREKMIEGAGEKFVVIVDESKLVPRLGCSGAVPVE
VIPFGAAHTLGLIRKVFDGLPGFHARLRMVKKDADEDTPFMTDNGNYIVEMFFEDGIRGD
LQNISDQLLRITGVVEHGMFLSMATTVIVANKDGTITVMDKKN
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcgccgccacctcgccgccgccgtccatgaagctggcgcaggaggacttgaag
cgtgtggcggcgcacatgggcgacgccgccgccgcctcgccaccgcccgtgaagctgacg
caggaggacttgaagcgcgtggcggcgcaccgcgcggtggagttcgtggagcccggcatg
gcgctgggactcggcacgggttccacggcggcgcacgcgctggaccgcctgggcgacctc
atccgcgcgggcgcgctcccgggcgtggcgggcgtgcccacctccctcaagacggagctc
cacgcgacccgcgtcgggatccctcttctcccgctcgggggcgaccgcgggcccgccagg
atccacctctccatcgacggcgccgacgaggtggacccggacctcaacctagtcaagggc
cgcggcggctcgttgctccgggagaagatgatcgagggggctggagagaaattcgttgtc
atcgtcgacgagtccaagctggtgccccgcctcgggtgttcgggcgcggtgcccgtcgag
gtcatccccttcggcgctgcccacacgctgggcctcatccgcaaggtgttcgatggattg
cctggcttccacgccaggctcaggatggtcaagaaagatgccgatgaggacacaccgttc
atgactgacaacggaaactacatcgtggagatgtttttcgaggatggcatccgcggcgac
ctccaaaacatcagcgatcaactcctccggatcaccggcgttgttgagcacggcatgttc
ctcagcatggccaccactgtcatcgtcgccaacaaggatggcaccatcactgtgatggac
aaaaagaattaa
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