Panicum virgatum (switchgrass): 120698557
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Entry
120698557 CDS
T07260
Name
(RefSeq) actin-1-like
KO
K10355
actin, other eukaryote
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120698557
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120698557
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
120698557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
120698557
NCBI-ProteinID:
XP_039838171
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Position
3K:24508802..24512359
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AA seq
376 aa
AA seq
DB search
MADEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ
AKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEDHPVLLTEAPLNPKANREKM
TQIMFETFECPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYTLPHAILRLD
LAGRDLTDHLMKILTERGYSLTTSAEREIVRDIKEKLAYVALDYEQELETARSSSSVEKS
YEMPDGQVITIGSERFRCPEVLFQPSLVGMESPGIHEATYNSIMKCDVDIRKDLYGNVVL
SGGSTMFPGIADRMSKEITSLAPSSMKIKVIAPPERKYSVWIGGSILASLSTFQQMWISK
AEYDETGPGIVHMKCF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgaggatattcagcctattgtgtgtgacaatggcactggaatggtcaaggca
ggttttgccggtgacgatgcaccaagagctgtcttccctagcattgtgggaaggccacgc
cataccggcgtcatggttggcatgggtcagaaggatgcctatgtgggcgatgaagctcag
gcgaagagaggtatcctgacactgaagtacccaattgagcacggcatcgttaacaactgg
gatgacatggagaagatctggcatcacaccttctacaacgagctccgtgttgcgcctgaa
gaccaccctgtactgctgaccgaggcccctctcaaccctaaggccaacagagagaagatg
acccagatcatgtttgagacctttgaatgtccggcaatgtatgttgcaattcaggccgtt
ctttccttgtacgctagtgggcgaacaacaggtattgtgctggactctggtgacggtgtg
agccacactgttccgatctatgaaggatacacacttcctcatgctattctccgtttggac
cttgctggccgtgaccttactgatcacctaatgaagatcctcacagagagagggtactcc
ctcacgacaagtgcagagcgtgaaattgtcagggacatcaaagagaagcttgcttacgtt
gcccttgactacgagcaggagctggaaactgcccggagcagttcctctgttgagaagagc
tacgaaatgcctgatggccaggttatcaccattgggtcagaaaggttcaggtgccctgag
gtgctcttccagccatctctcgttggcatggagtctcctggcatacatgaagctacatac
aactccatcatgaagtgcgatgtcgatatcaggaaggatttgtatggtaatgttgtgctc
agtggaggatctaccatgttccctgggatcgctgatcgtatgagcaaagagatcacgtcc
ctggctcctagcagcatgaagattaaagtgattgcgccacctgaaagaaaatacagtgtc
tggattggtggctctatactggcctctctcagcacttttcagcagatgtggatctccaag
gcagagtatgacgaaactggtccgggcattgtccacatgaagtgcttctaa
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