Panicum virgatum (switchgrass): 120698642
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Entry
120698642 CDS
T07260
Name
(RefSeq) MADS-box transcription factor 4-like
KO
K09264
MADS-box transcription factor, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120698642
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
120698642
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
K-box
HALZ
DivIC
Cnn_1N
APG6_N
Motif
Other DBs
NCBI-GeneID:
120698642
NCBI-ProteinID:
XP_039838271
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Position
3K:complement(25562161..25564478)
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AA seq
215 aa
AA seq
DB search
MGRGKIEIKRIENSTNRQVTFSKRRAGLVKKAREIGVLCDAEVGVVIFSSGGKLYDYCSP
RTSLSRILEMYQTNSGKILWDEKHKSLSAEIDRVKKENDNMQIELRHLKGEDLNSLQPTE
LIAIEEALQNGQTNLRDKLMDHWRMHKRNGKMLEDEHKMLSFRMAYQHQQDVELSGGMRE
LEIGYHQVQHDRDFTSQMPFTFRVQPSHPNLQEDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcggcaagatcgagatcaagaggatcgagaactccaccaaccgccaggtgacc
ttctccaagcgccgggccgggctcgtcaagaaggcccgcgagatcggcgtgctctgcgac
gccgaggtcggcgtcgtcatcttctccagcggcggcaagctctacgactactgctcgccc
aggacctcgctatccaggatcctggagatgtaccagaccaactccgggaagatactgtgg
gatgagaagcacaagagcctgagtgcggagatcgacagggtcaagaaggagaacgacaac
atgcagattgagctcaggcatctgaaaggcgaggatctgaactccctgcagcccacggag
ctgatcgccatagaggaggcgctccaaaacgggcagaccaacctgcgtgacaagctaatg
gaccactggaggatgcacaagaggaacgggaagatgctcgaggacgagcacaagatgctg
tcttttaggatggcctaccagcaccaacaggatgtcgagctcagtggaggcatgagggag
ctggagatcgggtaccaccaggtccagcacgacagggatttcacctcccagatgccgttc
accttccgggtgcagcccagccaccccaacctgcaggaagatgagtag
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