Panicum virgatum (switchgrass): 120698650
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Entry
120698650 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 16-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120698650
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120698650
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120698650
NCBI-ProteinID:
XP_039838291
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Position
1K:19340602..19344049
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AA seq
498 aa
AA seq
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MEDHRGGGAVGGGGEVEKSSALGEVRRQLRLAAPLAAGLLLQKVIQTISILFVGRLGELP
LASASLATSFANVTGFSLLSGMASSLDTLCGQAFGAGQRHLLGVYKQRAMLVLAAATAPV
AAVWAYAGEILVWFRQDRAIAAGAGSYTRRMLPALLLFGQLQCHVRFLQPQNVVVPVMAS
SAATAGAHVAVCWLLVRRLGMGANGAALANAVSNLVNLTVLVIYVRVSPACRDTWTGFSR
EAFRGIPGFLKLAVPSAAMVCMEWWSFEILVLLSGLLPNPKLETAVMSICFNTYVFAFML
PMGLGSAASIRVSNELGAGRPQAARLATRVVILLAISLGVCEGLFMVLARNLLGYAYSNE
KEVALYTAKLTPILAVCTLFDSLQCVLSGIVRGCGRQKIGAFINFSAFYIVGIPAASIFA
FVCHLRGMGLWLGILCGVAVQMLLLLCITLCTNWNKEALKANDRVFSSSLPVGNTVTSGG
SEHPNGCSFVGKGAQGTI
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcaccgcggaggcggcgccgtgggaggaggaggcgaggtcgagaagagctcg
gcgctgggtgaggtcaggaggcagctgcgcctcgccgcgccgctcgccgccgggctcctc
ctgcagaaggtcatccagaccatctcgatcctgttcgtcggccgcctcggcgagctcccc
ctcgccagcgcctccctcgccacctccttcgccaacgtcacgggcttcagcttgctgtca
ggcatggcgagcagcctggacacgctgtgcgggcaggccttcggcgcggggcagcgccac
ctgctcggcgtctacaagcagcgcgccatgctggtgctggccgcggcgaccgcccccgtg
gcggcggtctgggcctacgccggcgagatcctcgtctggttccggcaggaccgggcgatc
gccgcgggggccggcagctacacccggcgcatgctcccggcgctgctcctgttcgggcag
ctgcagtgccacgtccgcttcctgcagccgcagaacgtcgtggtgccggtgatggcgagc
tccgccgccaccgccggggcgcacgtcgccgtctgctggctactggtgcgccgcctgggc
atgggcgccaacggcgccgcgctggccaacgccgtctccaacctcgtcaacctaacggtc
ctggtcatttacgtcagggtctcgccggcctgcagggacacctggacggggttctcccgc
gaggcgttccgcggcatcccgggcttcctcaagctcgccgtgccgtccgctgccatggtc
tgtatggagtggtggtccttcgagatccttgtgcttctttcaggtcttctccccaaccca
aagctcgagaccgccgtgatgtctatctgcttcaacacctatgtctttgcattcatgctc
ccgatgggacttggttctgcagcaagcattcgtgtttcgaacgagcttggtgcaggacgg
ccgcaggcggcgcgcctcgcgacgcgggtggtcattctcctggcgatctccctgggcgtt
tgtgaaggtcttttcatggtcctggcccgtaatctactgggatacgcgtacagcaatgag
aaggaagtggccttgtacaccgctaagctgacgccgatcctcgcggtgtgcaccttattt
gacagtctgcagtgtgttctttcaggtattgttagaggctgtggccggcaaaagattggt
gcctttatcaacttttctgcattctatattgttggcatccctgcggcatccatattcgcc
tttgtctgtcatctcagaggaatgggactctggcttggtatcttgtgtggagtagcagtg
cagatgctcttgcttctctgcatcaccttgtgcaccaactggaacaaagaagcactgaag
gccaatgatagagttttcagttcttctcttcctgtcggcaacacggtaacatcaggtggt
agcgagcatccaaatggatgcagttttgttggtaagggtgcgcaagggaccatttga
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