Panicum virgatum (switchgrass): 120698677
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Entry
120698677 CDS
T07260
Name
(RefSeq) beta-hexosaminidase 3-like
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00511
Other glycan degradation
pvir00513
Various types of N-glycan biosynthesis
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir00531
Glycosaminoglycan degradation
pvir00600
Sphingolipid metabolism
pvir00603
Glycosphingolipid biosynthesis - globo and isoglobo series
pvir00604
Glycosphingolipid biosynthesis - ganglio series
pvir01100
Metabolic pathways
pvir04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
120698677
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120698677
00513 Various types of N-glycan biosynthesis
120698677
00531 Glycosaminoglycan degradation
120698677
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
120698677
00604 Glycosphingolipid biosynthesis - ganglio series
120698677
00511 Other glycan degradation
120698677
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120698677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120698677
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
120698677
Chaperones and folding catalysts [BR:
pvir03110
]
Intramolecular chaperones
Others
120698677
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
120698677
NCBI-ProteinID:
XP_039838328
LinkDB
All DBs
Position
3K:complement(26045194..26051529)
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AA seq
532 aa
AA seq
DB search
MAWAARLLLALLAAAAAAAAVGPRAGAGAGRVDLWPMPASVARGAQTLLVSRDLRLSTAG
SNYSDGRGILREAFQRMVAVVELDHVANGSYGGRGSPVLAGVRVVVRSPSDELNFGVDES
YKLSVPATGNPLYAQIEAQTVFGALHALETFSQLCNFDFNARLIELHSAPWTIVDMPRFH
YRGLLIDTSRHYLPVPVIKSVIDSMTFSKLNVLHWHIVDEQSFPLQIPSYPKLWNGAYSY
SERYTFDDAIDIVQYAEKRGVNVLAEIDVPGHALSWGVGYPSLWPSATCKEPLDVSNDFT
FQVINGILSDFSKIFKFKFVHLGGDEVNTSCWTTTPRIKSWLIQHGMNESDAYRYLVLRA
QKIAISHGYDIINWEETFNNFGDKLDRKTVVHNWLGSGVAEKVVTAGLRCIVSNQDKWYL
DNLDATWEGFYMNEPLTNIYNPEQQRLVLGGEVCMWGEHIDASDIQQTIWPRAAAAAERL
WTPVEKLAKDAGSVAARLARFRCLLNQRGVAAAPLAGYGRSAPSEPGSCQRQ
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgggcggcgaggctgctgctggcgctgctcgcggcggcggcggcggcggcggcg
gtcgggccgcgcgccggcgccggggccggccgcgtcgacctgtggccaatgccggcgtcg
gtggcccgcggggcgcagacgctgctcgtcagccgggacctcaggctgtccaccgccggg
agcaactactccgacgggaggggcatcctcagggaggcgttccagcggatggtggccgtc
gtggagctcgaccacgtcgccaacgggagctacggcggccggggctcgcccgtgctcgcc
ggcgtccgcgtcgtcgtccgctcgcccagcgacgagctcaacttcggggtggacgaatcg
tacaagctgtccgtgcctgcgaccgggaacccgctgtacgcgcagatcgaggctcaaaca
gtttttggagcgcttcacgccttggagacgtttagccaattgtgcaactttgatttcaat
gcaaggctgattgaacttcattcagctccttggactatcgtggacatgccgaggtttcat
taccgagggcttcttattgatacttcaaggcattatcttcctgtcccagtgataaaaagt
gtaattgattcaatgaccttcagtaaactgaacgttcttcattggcatatcgtggatgag
caatcatttccccttcaaataccttcgtacccaaaattatggaatggtgcatactcttat
tcagagagatatacatttgatgatgctatcgacattgtacagtatgctgaaaaacgaggt
gtgaatgtcttggctgagattgatgtacctggccatgctctttcatggggtgtcggatat
ccatcattgtggccatcagctacatgtaaagaacctcttgatgtcagcaatgacttcaca
ttccaagtgattaacggaattctttcagatttcagcaagatttttaagttcaagtttgtc
catttaggaggagatgaagtaaacacaagttgctggaccaccacaccacgcattaaatca
tggttgattcagcatggcatgaatgaatctgatgcctacagatatcttgtactgagagct
caaaagatagccatatcacatggttatgacattattaactgggaagagacatttaacaac
tttggagacaagttggatcgtaaaaccgtggtgcataactggcttggaagtggagttgca
gagaaagtggttactgctggtctgagatgcattgtaagcaaccaggataagtggtaccta
gataacctggatgctacatgggaaggattttacatgaatgaaccattgacaaatatctac
aacccggaacagcagagattggttcttggtggtgaggtatgcatgtggggtgaacacata
gatgcatcagacattcagcaaaccatttggccacgtgctgcagcagctgcagagcggctg
tggacacccgttgagaagcttgcgaaggacgcgggatccgtcgctgcaagattggcacgc
ttcaggtgcttactgaatcaaagaggggttgctgctgcaccgctagctggttatggtcgt
tcagcgccgtcggaaccaggatcctgtcaaaggcagtag
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