KEGG   Panicum virgatum (switchgrass): 120698773
Entry
120698773         CDS       T07260                                 
Name
(RefSeq) RNA demethylase ALKBH10B-like
  KO
K10767  mRNA N6-methyladenine demethylase [EC:1.14.11.53]
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvir03019]
    120698773
Enzymes [BR:pvir01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.53  mRNA N6-methyladenine demethylase
     120698773
Messenger RNA biogenesis [BR:pvir03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     120698773
SSDB
Motif
Pfam: 2OG-FeII_Oxy 2OG-FeII_Oxy_2
Other DBs
NCBI-GeneID: 120698773
NCBI-ProteinID: XP_039838439
LinkDB
Position
3K:27533738..27541179
AA seq 589 aa
MTTAAAAGMPGSPADSAAAAEVAARDAVIGWFRGEFAAANAMIDALCGHLAQIGGGGAEY
EAAFAALHRRRANWFPVLHMQKFYPVADVAAELRRVADARAAAAAAAGSCCYSEEEAAST
VIHEPMEDLPAEPEPEPEREPEPEQDPVQQDPAPASEEADGAAVVNPTADAEYHEADAEV
DSSGDSSERKAASTEDDTAADGHHTDQGSQGEHSLPESYPICSDHEECIARPERIKIQKG
FVAKESVKGHMVNVVKGLKIYEDVFTTSEIMKVADFITEIRQAGRNGELSGETFIFFNKQ
IKGNKREIIQLGVPLFQPTTEESNCHIEPIPLVLQAVIDHLVLWRLIPESRKPNSVIINF
FDEDEHSQPYFKPPHLDNPISTLLLSETTMAFGRSLVTDSNGNYKGPLTLSLKQGSLLVM
RGNSADMARHVVCPSSNRRVSITFARVRPSTPVDLSPLPSPTKAMTPWQPQPAAAAQVAA
PACLAQKAPVSGAIIGYAPAPQAVLAPAAWGMAVRAPVMMVAAAPARPMVMASSGAAAGG
GNVGKRMGRSGTGVFLPWTVGPKRYNKHLPPRIQKRRFSAMMSPIEAQG
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgacgacggcggcggcggcgggcatgccggggtcgccggcggactcggccgcggcggcg
gaggtggcggcgagggacgcggtgatcgggtggttccgcggggagttcgcggcggccaac
gccatgatcgacgcgctgtgcggccacctcgcgcagatcggcggcggcggggccgagtac
gaggccgccttcgccgcgctccaccgccgccgcgccaactggttccccgtcctccacatg
cagaagttctaccccgtcgccgacgtcgccgccgagctgcgccgcgtcgccgacgcccgc
gccgccgcggccgccgcggccgggtcgtgctgctactccgaggaggaggccgcgtccacg
gtgatccacgagcccatggaggacctccccgccgagccggagccggagcccgaacgagag
cccgagcccgagcaggatcccgtacaacaggatccggcaccggcgtccgaggaggccgac
ggcgccgccgtcgtcaaccccaccgcggacgctgagtaccacgaggcggacgctgaggta
gattcctcgggagattcgtcggagcggaaggccgcctccacggaagacgacaccgccgct
gacggacatcatactgatcaaggatctcaaggggaacacagcctaccagagagctatccc
atctgctctgaccatgaggagtgcattgcccgtcctgagaggatcaagatccagaaaggt
ttcgtggccaaggagtccgtgaaggggcacatggttaatgttgtgaaaggcttgaagata
tatgaagatgtgtttacaacatcggagatcatgaaagttgccgatttcatcactgaaatt
cgtcaggctggccgaaatggagaactttcaggtgagactttcatattcttcaacaagcag
atcaaaggaaacaagagggagatcattcagcttggtgtcccattatttcaacctaccaca
gaggaatctaattgccacatagaaccaatccccctcgtcctgcaggctgtcattgaccat
cttgttctttggcgtttaataccagaaagcaggaaaccaaacagtgtcatcatcaacttc
tttgatgaggatgaacactcgcaaccctacttcaagcctcctcatctggacaacccaatt
tcaactcttctgctgtctgagactacaatggcatttggcaggtcactcgtcactgacagc
aacggcaactacaagggacccctcacactctcactaaagcaagggtccctcctagtcatg
cgtggtaacagcgccgacatggcgcgccacgtggtgtgcccgtcgtccaaccggcgcgtg
agcatcacgttcgctcgcgtcaggccgtccacgccggtggacctgagcccgctcccgtcg
cccaccaaggccatgacgccctggcagccgcagccggccgcggccgcccaggtggcggcg
cccgcgtgcttggcgcagaaggcccccgtcagcggcgccatcatcgggtacgccccggcg
ccgcaggccgtgctggcgccggccgcgtggggcatggccgtgcgcgcgcccgtcatgatg
gtggccgcggcgcccgcgaggcccatggtgatggcctcctcgggcgccgccgccggcggc
ggcaatgttggcaagcggatgggccgcagcggaaccggcgtgttcctgccgtggacggtc
gggccgaagcgctacaacaagcacctcccgccgcgcatccagaagcgccggttctcggcc
atgatgtcgcccatcgaggcgcagggctga

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