KEGG   Panicum virgatum (switchgrass): 120698780
Entry
120698780         CDS       T07260                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03020  RNA polymerase
pvir03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120698780
  09124 Replication and repair
   03420 Nucleotide excision repair
    120698780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvir03021]
    120698780
   03019 Messenger RNA biogenesis [BR:pvir03019]
    120698780
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120698780
Transcription machinery [BR:pvir03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     120698780
Messenger RNA biogenesis [BR:pvir03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     120698780
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      120698780
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 120698780
NCBI-ProteinID: XP_039838446
LinkDB
Position
3K:27619055..27621416
AA seq 177 aa
MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDIGKGLIR
EGTGYVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGAAV
NT seq 534 nt   +upstreamnt  +downstreamnt
atgttcttccacatcgtgctggagcggaacatgcagctgcacccgcggcacttcgggccg
cacctccgggacaagctcgtgtccaagctcatcaaggacgtcgagggcacctgcagcggg
cggcacgggttcgtggtggcgatcacgggggtggaggacatcggcaaggggctcatccgg
gagggcaccggctacgtcaccttccccgtcaagtaccagtgcgtcgtcttcaggcccttc
aagggggaaatcctcgaggccgtcgtcaccatggtcaataagatgggcttcttcgcagag
gctgggccggtgcagatttttgtgtcgaatcatttgattcctgatgatatggagttccaa
tctggtgatgtgccaaactacacaacttccgatggatcggtaaaaattcagaaggagagt
gaggtgcggttgaagattattggtactcgtgttgatgcaacagaaattttttgcattggc
acaataaaagacgactttctgggtgttatcagcgatcctggtgcagcagtgtaa

DBGET integrated database retrieval system