Panicum virgatum (switchgrass): 120698791
Help
Entry
120698791 CDS
T07260
Name
(RefSeq) ARM REPEAT PROTEIN INTERACTING WITH ABF2-like isoform X1
Organism
pvir
Panicum virgatum (switchgrass)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
BTB
HEAT
HEAT_EZ
HEAT_2
Adaptin_N
Atx10homo_assoc
KLHL33-like_BTB_POZ
Insc_C
Arm_2
IFRD
RTP1_C1
Syntaxin
Motif
Other DBs
NCBI-GeneID:
120698791
NCBI-ProteinID:
XP_039838456
LinkDB
All DBs
Position
3K:27755820..27778121
Genome browser
AA seq
741 aa
AA seq
DB search
MEAEQQKQQPQRPRRKGQKRKLEDEAAAAAIAAAAAAAASSLGSAGADDDNEEEDSGSAA
PPEICCRHSHAALAREVRTQVDVLLRCASSWRRADRAAAKRATHVLTELAKNEEVVNAIV
EGGAVPALVRHLEEPPAAAAAAQEDQQLRPFEHEVEKGAAFALGLLAVKPEHQQLIVDAG
ALPPLVNLLRRHNNKTNSRVVNRLIKRAADAITNLAHENSNIKTVVRMEGGIPPLVELLE
SQDLNVQGAAAGALRTLAFKNDENKAQIVQCNALPTLILMLRSEDAAIHYEAVGVIGNLV
HSSPNIKKEVLNAGALQPVIGLLSSCCTESQREAALLLGQFASAESDCKVHIVQRGAVRP
LIEMLQSSDVQLREMSAFALGRLAQDKHNQAGIAYNGGLLPLLKLLDSKNGSLQHNAAFA
LYGVADNEDYVSDFIKVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKINGRVLKHLLYMM
RVGEKSVQRRVALALAHLCAPGDQRTIFIDNNGLDLLLDLLISMSSKHQQDGSAALYKLA
NKAAALSPMDAAPPSPTPQVYLGEQYVNSSTLSDVNFLVEGKRFYAHRIALLASSDAFRA
MFDGGYREKDARDIEIPNIRWDVFELMMRFIYTGSVQVTSEIAQDVLRAADQYLLEGLKR
LCEYTIAKDVNIDNVYDMYDLSEAFHAVSLRHKCILYILEHFNKICTRAGSAQLIQRVIP
ELRNFLTKALSSSPSDNNAQI
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggagcagcagaagcagcagccccagcgtccgcgccgcaaggggcagaagcgg
aagttggaggacgaggcggccgccgccgccatcgccgcggcggcagcggcggcggcgtcc
tcgctcggcagcgcgggcgccgacgacgacaacgaggaggaggactccggctcggcggcg
ccccccgagatctgctgccgccactcccacgcggcgcttgcccgcgaggtccgcacgcag
gtcgacgtcctcctccgctgcgcctcctcatggcgccgtgccgaccgcgccgccgctaag
cgcgctacccacgtcctcaccgagctcgcaaaaaatgaggaggttgtcaacgcgatcgta
gagggaggcgctgtgccggccttggtgcgccacctagaggagcctcctgctgctgcggcg
gcggcgcaggaggatcagcagctgcggccgttcgagcatgaggtcgagaagggcgctgcc
ttcgctctgggtctcctagctgtaaagcctgaacatcaacaacttattgttgatgctggt
gctctacctccgcttgtgaacctcttgagaaggcataacaataagacaaactcgagggta
gttaaccgtctcatcaagagagcagctgatgcaattaccaatctcgctcatgaaaatagc
aacatcaaaactgtcgtcagaatggaaggtggaataccgccacttgttgaattgctagaa
tcacaggatcttaatgtgcagggagcagctgcaggggccttgcgaactctagcttttaaa
aatgatgagaacaaagcccagattgttcaatgcaacgctttgccaactttgatcttaatg
ctgcgatcagaggatgctgcaattcactatgaagcagttggtgtcattggaaatttggtt
cattcttcgccaaacatcaagaaggaggttcttaatgccggggcactgcaacctgtgatt
ggattattaagttcttgttgtacagaaagccaacgagaagccgctttgttgctagggcaa
tttgcttctgccgagtctgattgcaaggtccatattgtgcaaaggggtgcagtccgacca
ttaattgaaatgctacagtcgtctgatgtccaactgagagaaatgtctgcttttgcactt
gggaggcttgcccaggacaaacataaccaagcaggtattgcatataatggcggtttgttg
cctttgttaaaacttcttgattcaaaaaatggatctctgcaacataatgctgcatttgcc
ctttatggagttgcggacaatgaggactatgtctccgacttcatcaaagttggaggtgtc
caaaagttgcaagatggggaatttattgtccaggcaacaaaggactgtgtggcaaaaaca
ttgaagaggttagaggagaagataaatgggcgagtgctgaaacacttgctttacatgatg
cgagtaggagagaaatctgtgcagaggcgtgttgctctggctctggcacacctttgtgcc
ccaggagatcaaagaacaattttcattgataataatggtctcgacttgcttcttgatctt
ctgatttccatgagctcgaaacatcaacaagatggttcggcagcattgtacaaattagcc
aacaaagctgcagctctttctcccatggatgctgcccctccatctccaacaccacaggtt
tacctcggcgagcaatacgtgaacagttcaacactttcagatgttaatttcttggtggaa
ggaaaacgcttctatgcacacagaattgctttgcttgcttcttcagatgcatttcgtgca
atgtttgatggtggctacagggaaaaggatgcaagagatattgaaattcccaatatcaga
tgggatgtttttgaactcatgatgagatttatctatacagggtctgtgcaggtaaccagc
gaaattgctcaggatgtacttagagctgctgatcagtatctcttagaaggcctcaaacgc
ctatgcgaatatactattgcaaaggatgtgaatatagataatgtatacgacatgtatgac
ttgtccgaagccttccatgccgtgtcactgagacataaatgcatcctgtacattctggag
cattttaacaagatctgcaccagagccggttcggctcagctgatccagcgtgttatcccg
gagctccgcaatttcctaaccaaggcgctgagttcgagtccaagtgacaataatgcgcag
atatga
DBGET
integrated database retrieval system
