Panicum virgatum (switchgrass): 120698803
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Entry
120698803 CDS
T07260
Name
(RefSeq) CSC1-like protein At4g02900
KO
K21989
calcium permeable stress-gated cation channel
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120698803
Transporters [BR:
pvir02000
]
Other transporters
Pores ion channels [TC:
1
]
120698803
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Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
SpoIIE_N
Motif
Other DBs
NCBI-GeneID:
120698803
NCBI-ProteinID:
XP_039838478
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Position
3K:complement(27910596..27918044)
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AA seq
767 aa
AA seq
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MGSLTDIGVSAGINILSALGFLLAFAVLRIQPINDRVYFPKWYLKGTRSSPRHLGTVISK
FVNADMSTYIRFLNWMPAALRMPEPELIEHAGLDSAVYVRIYLLGLKIFVPIALLAFAVL
VPVNWTSGTLENEKGLSYDQIDKLSISNLGKGSKRFWAHIAMCYVFTFWVFFVLFHEYKV
VTTMRLRFLANQNRRPDQYTVLVRNVPPDPDETVSEHVEHFFAVNHCDHYLSHQIVYNAN
HLSGLVEKKKGLQNWLIYYENKHAKNPAKKPTMKTGLWGLWGQRVDAIEYYKKEIEELCK
QEDEERQKVITDPNSIMPAAFVSFKTRWGAAVCAQTQQTSNPTVWLTEWAPEPRDVYWAN
LAIPYVELSVRRLIIAVSFFFLTFFFMVPIAIVQSLANLDDIEKVLPFLKPIIERNSLRP
VIQGFLPGIVLKIFLILLPTILMAMSKIEGHTSLSGLDRKTATKYYVFLFVNVFLGSVIT
GTAFQQLDNFIHQSANKIPEVVGESIPMKATFFMTYIMVDGWAGVAAEVLRLKPLVIFHI
KNAFLVRTEHDREQAMDPGSLDFYNTEPRLQLYFLLGLVYAVVTPMLLPFIIVFFSLAYL
VFRHQIINVYNQQYESGAQFWPDVHMRLIIALMVSQILLLGLLSTQEAEKSTIALLPLPV
LSLWFHYVCKGRFEPAFVKFPLQDAMVKDTLERANDPTLNLRDYLKGAYVHPVFQKNDIY
ELVTIDEEEKNPLVVTKRQSRMTTPGGSKFNSSSGTNEGEFSRIPPP
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgggttctctcactgacattggtgtttctgcgggcataaacatactatctgcattgggt
ttccttctagcgtttgcagttctgaggatacagcctattaacgatcgagtgtactttcca
aaatggtacctcaaagggacaagaagcagcccaaggcacttaggaactgttatctcaaag
tttgtcaatgcggatatgtcaacatatattcggtttctgaactggatgcccgcagcactg
agaatgccagaacctgaactcattgagcatgcggggcttgactctgcggtatatgtccgc
atctatcttctcggtttaaaaatatttgtgccaattgcgctcctagcatttgctgttcta
gttcccgtcaattggactagtggaacattggaaaatgaaaagggactaagttatgaccaa
attgacaagctttcgatatcgaatcttggaaaaggttcaaaaaggttttgggcacacata
gcaatgtgctatgtgtttacattttgggtgttcttcgtgttgtttcacgaatataaggtt
gtcacaactatgagattgcgctttcttgctaatcaaaatcgtcgacctgatcaatacacg
gttcttgtccgaaatgtacctccagaccctgatgaaacagttagtgaacatgttgagcac
ttctttgctgtgaatcactgtgatcattacctcagtcaccagattgtatataatgcaaac
catctttctggcttggttgagaagaagaagggcttgcaaaactggttaatctactacgaa
aacaagcatgctaaaaaccctgcaaaaaagccaaccatgaagacaggactgtggggtctt
tgggggcaaagagtggatgctatagaatactacaaaaaggaaattgaggagttatgtaaa
caggaagatgaggagagacaaaaggtgatcactgatccaaattctattatgccggcggca
tttgtgtctttcaaaacacggtggggtgctgctgtttgtgctcaaacacagcaaacaagt
aatccaaccgtgtggttaactgagtgggctccagaacctcgtgatgtttactgggctaat
cttgcaatcccttatgtcgagctctcagttagaaggcttattatagctgtttcctttttc
tttctgacctttttcttcatggtaccaattgcaattgtccaatccttggccaacctagat
gatatcgagaaggtgcttcctttcttgaaacctataatagaaagaaattcccttaggccg
gttattcaaggtttcttgccagggatagtattgaaaatattccttatacttctcccaaca
attctgatggccatgagcaagatcgaaggtcacacatcactctctggattggacaggaaa
acagcaacaaaatactacgtattccttttcgtgaatgtgttcttggggagtgtaataacc
ggaacagcattccaacagctcgacaacttcatccatcagtctgctaacaaaattccagag
gttgttggagagtctattcccatgaaggcaacatttttcatgacatacataatggttgat
ggctgggctggtgtagctgctgaagttcttcggttgaagccattagtcatattccatata
aagaatgctttcttggttagaactgagcacgaccgcgaacaagccatggatcccggaagc
ctggatttttacaacacagaaccacggttacagttgtactttctgcttgggcttgtatat
gcagttgtcacaccaatgcttcttcccttcatcatagtgttcttcagcctcgcatatctt
gttttcagacatcagataattaatgtctataatcagcaatatgaaagtggtgcacaattc
tggccagatgtgcacatgcgactaatcatagcattgatggtatcacaaattctcctactg
ggactgctgagcacgcaggaagcagagaagtccactattgctcttctcccacttcctgtc
ctctccctatggttccactatgtttgcaagggccggtttgaaccagcatttgtgaagttc
cccttgcaggatgccatggtaaaggacacactggaacgggcaaatgacccgactttaaat
ttgagagactacctgaaaggtgcttatgtgcacccagtattccagaaaaatgacatatat
gagcttgtcaccatagatgaggaagagaagaaccccctcgttgtgacaaagcggcagtct
cgcatgaccacaccaggaggaagcaaattcaattcaagttctggtactaatgaaggggag
ttcagtcggatacctcctccctag
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