Panicum virgatum (switchgrass): 120698864
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Entry
120698864 CDS
T07260
Name
(RefSeq) ABC transporter G family member 23-like
KO
K05681
ATP-binding cassette, subfamily G (WHITE), member 2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir02010
ABC transporters
pvir04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120698864
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
120698864
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120698864
04147 Exosome [BR:
pvir04147
]
120698864
04090 CD molecules [BR:
pvir04090
]
120698864
Transporters [BR:
pvir02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
120698864
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of breast milk
120698864
CD molecules [BR:
pvir04090
]
Proteins
120698864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
AAA_21
SMC_N
ABC2_membrane_7
AAA_22
RsgA_GTPase
ABC2_membrane_3
AAA_16
AAA_29
PDR_assoc
Rad17
AAA_18
nSTAND1
AAA_30
AAA_23
MMR_HSR1
AAA_33
AAA_28
Motif
Other DBs
NCBI-GeneID:
120698864
NCBI-ProteinID:
XP_039838554
LinkDB
All DBs
Position
3K:29273452..29285453
Genome browser
AA seq
707 aa
AA seq
DB search
MVMGDEGGSSSSELYLLSRFAPSSSSAQLRGRGERAMDHHQDDLSAELDPALLMSASTSS
SSPPGSASPSSSFSHPSPPHYTLAVSDLSSPAPRRRSSILPPFLSSSCIPTSGPAATDGG
EGLLLKSVSFTASSSNILAVVGPSGAGKSTLLRILSGRGAGSEIATPGTVSLNGRAVTSR
AQLRRLCGFVTQDDNLLPLLTVRETILFAARFRLRGGAATARERLDRAEALIQELGLSEV
ADSYVGGGGDGAARGVSGGERKRVSIAVDMVHDPPVLLLDEPTSGLDSRSAVDVLALLRR
VSRARRQVVVLSIHQPSYRMLGYISSLLLLSRGTVAHSGTLRSLEDALARLGHKIPAQLN
PLELAMETEVTAELAEDRYRHGAGLLLLDEDAVSSSSLLLDSSSNDVAVPDRGGYYCSRA
TEVSALAVRCWRTMYRTRELFAARGAQAVVGGLGLGSVYFRLSPDGPDGVALRLGLFAFT
LSFLLSSTVEALPILLHERRVLMREASRRAYRLSSYVAANALVFAPCLLAVALLFAGPLY
WLAGLRAAPRGAAAFAFFVLAVWLIVLMASSLVLFLSAVSPDFVLGNALICVCLGVFFLF
SGYFIPRASIPRYWAFMYYVSMYRYPLDLLLINEYGGGARGRCVAWVGGNAMAGGGVCLR
TGADVLRDRGIDEGMKWVNVGVMLGFFLLYRVMCWAVLVRRASKTTL
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggtcatgggagacgaaggcggcagcagcagcagcgagctatatctgctcagccgcttc
gcgccatcgtcgtcgtcggctcagctgagaggcaggggagaaagggccatggatcaccac
caggacgacctgtcggcggagctggacccggcgctgctcatgtccgcgtccacgtcctcc
tcgtcgccgccgggctccgcctcgccctcctcctccttctcccacccgtccccgccccac
tacaccctcgccgtcagcgacctctcctcccccgcgcctcgccgccgctcctccatcctg
ccgcccttcttgtcatctagctgcatccccacctccggcccggcggccaccgacggcggc
gagggcctgctcctcaagtccgtgtccttcaccgcctccagctccaacatcctcgccgtc
gtgggccccagcggcgccggcaagtcgacgctgctccgcatcctctccggccgcggcgcg
gggtccgagatcgccacgccggggacggtgtcgctcaacggccgcgccgtcacctcccgc
gcgcagctgcggcggctctgcgggttcgtcacccaggacgacaacctgctgccgctgctc
acggtccgcgagaccatcctcttcgccgcgcgcttcaggctccgcggcggcgccgccacc
gcgcgggagcgcctcgaccgcgcggaggcgctcatccaggagctgggcctgtccgaggtg
gccgacagctacgtcggcggcggcggggacggcgccgcgcgcggcgtgtccggcggcgag
cggaagcgggtgtccatcgcggtggacatggtgcacgacccgccggtgcttctgctggac
gagcccacgtcggggctggacagccggtcggccgtggacgtgctggcgctgctgcgcagg
gtgtcccgcgcgcggcggcaggtggtggtgctcagcatccaccagcccagctaccgcatg
ctcggctacatctcctcgctgctgctcctctcccgcggcaccgtcgcgcactcgggcacg
ctccggtcgctcgaggacgcgctggcgcggctgggccacaagatccccgcgcagctcaac
ccgctggagctcgccatggagacggaggtcaccgccgagctcgcggaggaccgctaccgc
cacggcgccgggctcctcctcctcgacgaggatgcggtgagcagcagcagcctcctcctc
gacagcagcagcaacgacgtcgccgtccccgaccgcggcggctactactgcagccgcgcc
acggaggtgtcggcgctggccgtgcggtgctggcgcaccatgtaccgcacgcgggagctc
ttcgcggcgcgcggggcgcaggccgtggtgggcgggctcggcctcggcagcgtctacttc
cggctgagccccgacggccccgacggcgtggcgctccggctggggctcttcgccttcacc
ctctccttcctcctctcctccaccgtggaggcgctgcccatcctcctccacgagcggcgg
gtgctgatgcgggaggcctcgcggcgcgcgtaccggctctcctcctacgtggccgccaac
gcgctggtcttcgcgccgtgcctcctcgccgtggcgctcctcttcgcgggcccgctctac
tggctcgcggggctccgcgcggcgccgcgcggggcggcggccttcgccttcttcgtgctc
gccgtctggctcatcgtgctcatggccagctcgctggtgctcttcctcagcgcggtgtcg
ccggacttcgtgctggggaacgccctcatctgcgtgtgcctgggcgtcttcttcctcttc
tccggctacttcatcccccgggccagcatcccgaggtactgggccttcatgtactacgtg
tccatgtacaggtacccgctggacctgctgctcatcaacgagtacgggggcggcgcgagg
ggcaggtgcgtggcgtgggtcggggggaacgccatggccggcggcggcgtgtgcctgcgg
accggggccgacgtgctcagggacaggggcatcgacgaggggatgaagtgggtcaacgtc
ggggtcatgctgggcttcttcctgctctacagggtcatgtgctgggccgtgctcgtcagg
agggcctccaagaccaccctgtga
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