Panicum virgatum (switchgrass): 120698890
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Entry
120698890 CDS
T07260
Name
(RefSeq) serine-rich adhesin for platelets-like isoform X1
KO
K09527
DnaJ homolog subfamily C member 7
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120698890
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP40 / DNAJ
120698890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaJ
TPR_1
TPR_2
TPR_19
TPR_11
TPR_8
TPR_16
Motif
Other DBs
NCBI-GeneID:
120698890
NCBI-ProteinID:
XP_039838591
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All DBs
Position
3K:complement(29845464..29856650)
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AA seq
1456 aa
AA seq
DB search
MPPAVAPDPPRQNPSGPDLPAAAAAPMANPGLGLGLAPPGAEPSAGAPPPSRRAPRLAKR
RHAPASSRSRAPQPPAGTWNPFGGGGTDGPRQDGTGGFGSENGGFGKGQAGCFVFGAAPA
VGQQVPEPPAAAASPSEAPFVFGSVRESLSRVEGLSAPSKLPDRMEKLNLRTSGEVGARF
GQGKDQKDGCSVFGVDISGLVSNSQVNVLPEKLTQLNLGCGEPLQSEKGDIGNGVPKSFV
FGGNSAGTFADSRNAAAPGAQSDASASVLGTDAKAMPEKSTQFDIGDQAPSRGKGIENTN
GAPFTFGSNAASVHLDSANNAASGANTSSSTAVNGFDDAGVLQEKLTQMNIGSDMPLHDM
RSAGCSHQPEVFTFRGGGAPGTVFGKETSSTSERSSEFFSANSNASSSSSDFLSTANSNA
SANGTDSSPPEKKSDLSAGGGVMLQRMESDNANCPPEALFGRNGTQSSISHSASIAMDDG
SNFVSDADTNISSARGTVDGVLPEKMTDLNIGSGIPSQSREDETATQPPEVFVFGNNAEA
TSGYGAVPQPKQESHPFTNLNCASSFSTFETAVPAFSFGTINAEREAAPDDPCAVKHDLP
GCSRETLFGLDSIKSAYRDKKEVHKSKRKNRRPTRLKQHAQVHHVTPKETFTNGDLAGDY
SPMDCSPYPAETEHVSTEAYVASDQSVHIGDSGIPNWNSSCADDLVSATEHLVIDADLQA
FGHESTVLNVDASESNFGSSFSSFEGDLSNASRHSFTNVNICLNGEHKTGATEACPDVYG
HNVNGQAYDESTYRTLHDFGEAVAFQPSTSNFSGLNFSFGASSSDISASAQRRSTRRKLR
TKGTPASKSSSTNSFVQPKSSQDMKGMQVSQDTKSSSINEDLVKQQAKRDSSAALEICET
WRTSGNKAYANGHFATAEDYYTRGINSISHHGASGHCSRALMLCYSNRAATRMSLGMIRE
ALQDCLTATSIDPSFIKAKVRAANCYLALGDLEDASRSYMSCLNNNTSSSDPKVFTEASD
GLEKVKRVTEWVSQCKELLEKRASPEATTALELISNALHISPHSDSLKEMKAEALLMLRR
YEEVIQLCQGSVNPAERNSVLFNADGEPKNSRVSEKTQFSGSYWRPYLICKSYFLSGKLD
EALDLLKKHEQVTPSQESDERTYHQCFSSLSATIRQLLSLKAAGNELFQARRYSDAVEQY
SAALACNSESRPFSAVCFCNRAAAYQALGQVTDAIADCSLAMVLDANYLKAISRRATLYE
MIRDYGQAANDVRKLILLLEKKVNVSGLSPKVFNKHSDLKQARARLSSIEDEAKKDAPLN
LYLILGVEPSCSAADIKKAYRKAALKHHPDKAAQLLVRNENTDDGFWRDVVKEVYADADH
LFKTIGEAYNVLSDPVKRQEYDFEEDVRKSRNRVSKSRSMHRSPEQNYGNRGFNPRQWQS
SRASRSRWYGYSDDFW
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atgccgccggcggtagcgcccgacccgccgcgccaaaaccctagcgggcccgacctcccc
gccgccgccgcggcccccatggccaacccgggcctagggctcggcctcgcgccgccgggc
gcggagccctccgccggggcgccgccgccttcgcgccgcgcgccccgcctggccaagcgg
cgacacgcgcccgcctcgtcccgctcccgcgccccgcagccccccgcagggacgtggaac
ccgtttggcggcggcggtacagatggtccgaggcaggacgggactggcggcttcgggagt
gagaacggaggattcgggaagggtcaggccgggtgctttgtgtttggtgctgctccggcg
gtgggccagcaggttccggagccgccagcggcagcagcttcacccagtgaggcaccgttt
gtgtttgggagcgtgagggagagcctgtctcgggtggagggattatctgcgccgtcaaag
ctgcctgataggatggaaaagcttaacctgcgcacatcaggagaggttggcgctcgtttt
ggtcaggggaaggatcaaaaggatggatgttctgtatttggtgttgatatttctggtttg
gtttctaacagccaggttaatgtgctcccggagaagcttacacaactcaatttaggctgt
ggagaaccattgcagagtgagaagggtgacattggtaatggtgtcccaaaatcatttgtg
tttggaggtaatagtgctgggacttttgctgatagtaggaatgctgctgcccctggtgca
cagtcagatgcttctgcctcagttctaggtactgatgccaaagctatgcctgagaagtcg
acacagttcgatataggtgatcaggcaccttccaggggaaaggggattgaaaatactaat
ggagcacctttcacttttggaagtaatgcagcaagtgtccatttggatagtgcaaacaat
gctgcatctggtgcgaataccagttcatccactgctgttaatggttttgatgatgctggt
gtgcttcaggagaagttaacacagatgaatatcggaagtgacatgccgttgcatgacatg
agaagtgctggttgtagtcatcaacctgaagtgtttacgtttcggggtggaggagcccca
ggtactgtttttgggaaggaaacaagcagcacttcagaaaggagcagtgaattcttctct
gcaaatagcaatgcttctagttcaagcagtgattttctctctacagcaaatagcaatgct
tcagctaatggcactgacagttcgcctccagagaagaaatcagatttgagtgcaggaggt
ggagtcatgttgcagaggatggaaagtgataacgctaattgtccaccggaggcattgttt
ggaagaaatggaacccagagctccatttctcactcagcaagcatagccatggatgatgga
agtaactttgtcagtgatgcagatacgaacatcagttcagctcgtggtacagtggatggt
gtgcttccagagaagatgacagatttaaatataggatctggaattccatctcagagcagg
gaagatgaaactgctactcaaccaccagaagtatttgtatttggaaataatgcggaggct
acttcaggatatggtgctgttccccaacccaaacaggagtcacatccatttacaaatttg
aattgtgcatctagtttctctacttttgagactgcagttcctgctttcagttttggaacc
ataaatgcagaaagagaagctgctcctgatgatccttgtgctgtcaaacatgatttgcct
gggtgttccagagagaccttatttggtttagatagtataaagtctgcatacagggacaag
aaagaagtacataaaagcaaaaggaaaaatagaagaccaactaggctaaagcaacatgct
caagtccatcatgttactcctaaggaaacctttaccaatggagatttagcaggtgactat
tcaccaatggattgttccccttatccggcagaaactgaacatgtttcaaccgaggcatat
gtggcttcagatcagtctgttcacataggtgatagtggtatccctaactggaactcaagt
tgtgcagatgatctagtttctgcaaccgagcacttggtcattgacgctgaccttcaggca
tttggacatgaaagtacagtactgaatgtagatgcatctgaaagcaatttcgggagcagt
ttttctagttttgaaggagatttaagtaatgcatcacggcattctttcacaaatgtcaat
atttgcttgaatggtgagcataaaacaggtgccacagaagcttgtcctgatgtttatggg
cacaatgttaatgggcaagcctatgatgagagtacctacagaactctgcatgattttggt
gaagctgttgcttttcaaccaagcacttcgaattttagtgggctgaactttagcttcggt
gcatcgtcatctgatatttctgcatcagcacaaagacgtagcacaagaaggaagttaaga
acaaaaggcactccagcatctaagtcatcaagtaccaactcttttgtacagccaaaatct
tcacaagatatgaagggcatgcaagtttcacaagatactaagtcatcaagtataaatgaa
gacttagtgaaacaacaagcgaaaagagattcttctgcagccttggagatttgtgaaact
tggcgtactagtggaaataaagcctatgcaaatgggcactttgctactgcagaggattat
tacacccgtggaataaactctatttcccatcacggcgcttctgggcactgttcccgcgct
ttgatgctgtgttatagcaaccgagctgctacaagaatgtcacttggcatgattcgggag
gcgcttcaggattgtttgactgctacatcaattgaccccagctttattaaagctaaagtt
agagctgcaaattgctaccttgcattaggtgatcttgaagatgcatcaaggagttacatg
tcctgtttgaacaataacacttcgagttctgaccccaaagtctttactgaggcttctgat
ggtttggaaaaagtcaagagagtgacagagtgggtatcccagtgcaaggaacttcttgag
aaaagagcatctcctgaagcaacaacagccttagaattgatctccaatgcattgcacata
agtccacattcggacagcctcaaggagatgaaagctgaggcattgctgatgctacgaaga
tatgaagaagtgattcaactatgtcaggggtctgtaaatccggctgaaagaaattcagtt
ttattcaatgctgatggagaaccaaagaattccagagtttctgaaaagacacaattctct
ggaagttattggcggccctaccttatttgcaagtcttatttcctttcaggaaagcttgat
gaagctcttgatttgttaaagaagcatgagcaagtcacaccttcccaagaaagtgatgag
aggacatatcatcaatgtttttcatcgttgtcagcaactataagacaactactctccctt
aaggctgctggaaatgaattatttcaagctaggagatattcagatgctgtggaacaatat
tcagcggctttggcatgcaatagtgaatcacgcccgttttcagctgtctgtttttgcaat
cgtgcagctgcatatcaagcacttggacaggttactgatgcaatagcagattgctcactt
gccatggttcttgatgcaaattatctaaaggcaatttcaaggcgagccaccttatacgag
atgataagagattatgggcaagctgccaatgatgtaaggaagctaatcttgcttcttgaa
aagaaagtcaatgtgtctggattatcaccaaaagtttttaacaagcacagtgatctcaag
caagcacgcgcgcggctctcatccatagaggatgaagcaaaaaaggatgctccgctgaat
ttgtatttaatcttgggagtggagccatcctgctctgcagcagatatcaagaaggcatat
aggaaagctgcattgaaacatcacccagacaaggctgctcaattactagtaaggaatgag
aatactgatgacggattttggagggatgttgtcaaggaagtttatgcagatgcggatcat
ctgtttaaaacaatcggggaggcatataatgttctttcggacccagtcaagcgtcaagag
tatgactttgaagaggatgtaagaaaatctcgaaacagagtatctaagtccaggagtatg
cataggtcacctgaacagaactatggcaacagaggttttaatccacgtcagtggcagtca
agcagagcatcacgctcacgatggtatggatattcagatgatttctggtaa
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