Panicum virgatum (switchgrass): 120698893
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Entry
120698893 CDS
T07260
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-2-like
KO
K03265
peptide chain release factor subunit 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120698893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120698893
03012 Translation factors [BR:
pvir03012
]
120698893
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
120698893
Translation factors [BR:
pvir03012
]
Eukaryotic type
Release factors
120698893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
120698893
NCBI-ProteinID:
XP_039838594
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Position
3K:complement(29899921..29903879)
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AA seq
439 aa
AA seq
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MGEGHEADKNIEIWRVKKLIKALDAARGNGTSMISLIMPPRDQISRVTKMLGDEYGTASN
IKSRVNRQSVLAAITSAQQRLKLYNRVPPNGLVLYTGTIVTDDGKEKKVTFDFEPFRPIN
ASLYLCDNKFHTEALNELLASDDKFGFIVMDGNGTLYGTLSGNSREVLYKFSVDLPKKHG
RGGQSAVRFARLRMERRHNYLRKVAELATQYFINPATNQPNIVGLILAGSADFKTELGKS
EMFDPRLQAKVVKMIDVSYGGESGFNQAIEMSAEVLSDVKFVQEKKLIGKYFEEISQDTG
KYVLGVDDTMTALEMGAVETLIVWENLDVRRYELKNSATGETVVKYLNTTQEADQRNFTD
EATSGDLEVIDNTLLLEWFAENYHQFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYPADV
TAFKEGDDLSDGEYDEDYE
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagggacatgaagctgacaagaacattgagatctggagggtcaagaaattaatc
aaggcgcttgatgctgctaggggaaatggtaccagcatgatttctctcatcatgccgcct
agggaccagatttcacgtgtcactaagatgctgggtgatgagtatggaactgcctcaaac
atcaagagcagagtcaaccgtcagtctgtcttggctgccataacctcagctcaacagagg
ttgaagctttacaatcgagttccccccaatggtttagtgctttatactggaacaattgtc
actgatgatggcaaagagaagaaggtaacctttgactttgagccatttaggcccattaac
gcgtccctgtatctctgtgacaacaagttccacactgaggcactgaatgagctcctggct
tctgatgataaatttggtttcattgtcatggatggcaatggaacattgtatggcactctg
agtggcaacagcagggaggttctttacaagtttagtgttgatctcccaaagaagcatggg
cgaggagggcaatctgcagtccgctttgcccgcctgcgcatggagaggcgacacaattac
ctgcgcaaagttgctgagcttgcaacacagtatttcatcaatcctgccactaatcagcca
aacattgttgggcttattcttgctggttctgctgacttcaagaccgaactgggaaaatca
gagatgtttgatccgcgtctgcaggccaaggttgtcaagatgattgatgtgtcttatgga
ggggaaagtggcttcaaccaagccattgagatgtctgccgaggttctttctgatgtcaag
tttgtccaagaaaagaagctgatcgggaagtactttgaggagataagccaggacacagga
aagtatgtccttggtgtggatgacaccatgacagccctggaaatgggagcggtagagaca
ctgattgtgtgggaaaaccttgatgtcaggcggtatgagctaaagaacagcgccactgga
gaaacagtcgtgaagtatctgaacaccacacaggaggctgatcagcgcaacttcactgat
gaggcaacatctggagatcttgaggtcattgacaacacgctactgctggagtggtttgct
gagaactaccaccagtttggctgcacgctggagtttgtcaccaacaagtcccaggaaggt
tctcagttctgccggggatttggcgggattggtgggatcctccgctacccagctgatgtc
actgccttcaaggaaggcgatgacttgtctgatggggagtacgacgaagactatgaatag
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