Panicum virgatum (switchgrass): 120698927
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Entry
120698927 CDS
T07260
Name
(RefSeq) ribulose bisphosphate carboxylase small chain A, chloroplastic-like
KO
K01602
ribulose-bisphosphate carboxylase small chain [EC:
4.1.1.39
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00630
Glyoxylate and dicarboxylate metabolism
pvir00710
Carbon fixation by Calvin cycle
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
Module
pvir_M00165
Reductive pentose phosphate cycle (Calvin cycle)
pvir_M00532
Photorespiration
pvir_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
120698927
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
120698927
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
120698927
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Motif
Pfam:
RuBisCO_small
RbcS
Motif
Other DBs
NCBI-GeneID:
120698927
NCBI-ProteinID:
XP_039838643
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Position
3K:30713704..30714925
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AA seq
223 aa
AA seq
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MGRHGGPGYICRREGSLPIYKGLVSSSRPASSIFPLLVNNTSSNKHILPSLAMAPTVMAS
SATSVAPFQGLKSTAGLPITRRSRSSAGFGNVTAGGRIRCMQVWPTENNKKFETLSYLPP
LSTEDLLKQVDYLIRNNWVPCLEFSKVGFVFRENATSPGYYDGRYWTMWKLPMFGCTDAT
QVYAELEECKKAYPDNYIRILGFDNVRQVQCVMFIAYKPSGAA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggggcgccatggaggccctggctatatatgccgtcgggagggaagcctgcctatctac
aagggactcgtcagctcaagcaggcctgcctcctcgatcttccccttattagttaataat
actagcagtaataagcatatactaccaagcctcgccatggcccccaccgtgatggcctcg
tcggccacctcagtggctccattccagggcctcaagtccaccgctggcctccccatcacc
cgccgctcccgaagctccgccggcttcggcaacgtcaccgccggcggaaggatcaggtgc
atgcaggtgtggccgacggagaacaacaagaagttcgagacgctgtcgtacctgccgccg
ctctccacggaggacctcctgaagcaggtcgactacctgatccgcaacaactgggtcccc
tgcctcgagttcagcaaggtcggcttcgtcttccgcgagaacgccacttcccccgggtac
tacgacgggcgctactggaccatgtggaagctgcccatgttcggctgcacggacgcgacc
caggtgtacgccgagctcgaggagtgcaagaaggcctacccggacaactacatccgcatc
ctcgggttcgacaacgtcaggcaggtgcagtgcgtcatgttcatcgcctacaagccctcg
ggcgccgcctaa
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