Panicum virgatum (switchgrass): 120698947
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Entry
120698947 CDS
T07260
Name
(RefSeq) chaperone protein dnaJ 49-like isoform X1
KO
K09518
DnaJ homolog subfamily B member 12
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120698947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120698947
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP40 / DNAJ
120698947
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaJ
DUF1977
Motif
Other DBs
NCBI-GeneID:
120698947
NCBI-ProteinID:
XP_039838686
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Position
3K:31044203..31052754
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AA seq
366 aa
AA seq
DB search
MDGNKDEALRSIKLAKSAFASGDRQRAEKLVRIAQRLDPSVPLDDLLNPAEKFDILNGAT
CQGKTGRGQACENPKTPKESVAHVNVDQVCTEENIRVVQDIRKKKDYYAVLGVERRCSVE
EIRKAYRRLSLKVHPDKNKAPGAEDAFKLVSKAFKCLSNDQSRKTYDHTGTIEDHESNEQ
YPNAMRQGMARRRTQARSGFYNYEEDFDPDEIFRSFFYGTHDNLFRARNTYRARGTVRQQ
QQRREHTVQGGSGINLTVLMHLAVVLIIVSLAFIPVQRPEYSLQKTYYFPLSKVTQKHGV
EYFVSKQDFDQKFPQGSQSREILEQYVFKDYKNLLGRYCHMERQRRQWAKDYPTPNCDRL
RNLSVP
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggatgggaacaaggacgaagccttgagatctatcaagcttgcaaaatctgcatttgca
tctggggataggcagcgcgcagaaaaattagtcagaattgctcaaagattggaccctagt
gttccacttgatgatttgttgaacccagctgagaagtttgatatcctgaacggtgctact
tgccaaggcaaaacaggaagaggtcaagcttgtgaaaaccccaaaacaccaaaagaatca
gttgctcatgttaatgttgatcaggtctgcactgaggagaatattagagtggttcaggat
atcaggaaaaagaaggattattatgcagttcttggagtagagaggagatgctctgtggag
gaaattaggaaggcctacaggagattatcactgaaggttcatcctgacaagaataaggct
cctggggcagaggatgcgttcaagttagtaagcaaggcgttcaagtgcctaagcaatgat
cagtcgcggaagacttatgatcatacaggaaccattgaggaccatgagtctaatgagcaa
tatcccaatgccatgaggcagggaatggccaggcggaggacgcaagcaagaagtggcttc
tataactacgaagaagattttgatccagatgagatattcaggtccttcttttatggcacc
catgataatttgtttcgtgcccggaatacctacagagcaaggggaacagttaggcaacag
caacagagaagggagcatacagtacagggtggttctggcataaacttaactgtgttaatg
caccttgcagtggtattgattattgtttcacttgcattcattccggtgcagcggcctgag
tattccctgcagaagacctattacttccccttatcaaaggtcactcaaaagcatggagtg
gagtactttgttagcaaacaagattttgatcagaagtttccacaggggagtcaatctaga
gaaattcttgagcagtatgtttttaaggactataagaatctgcttggaagatattgccat
atggaacgtcaacgacgtcaatgggctaaggactaccctacccctaactgtgacaggcta
aggaacctatctgtaccataa
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