Panicum virgatum (switchgrass): 120699026
Help
Entry
120699026 CDS
T07260
Name
(RefSeq) cation-chloride cotransporter 1-like
KO
K14427
solute carrier family 12 (potassium/chloride transporter), member 4/6
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120699026
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC12: Electroneutral cation-coupled Cl cotransporter
120699026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AA_permease
SLC12
AA_permease_2
Na_Ala_symp
NAD_binding_6
Motif
Other DBs
NCBI-GeneID:
120699026
NCBI-ProteinID:
XP_039838807
LinkDB
All DBs
Position
3K:32682607..32700816
Genome browser
AA seq
999 aa
AA seq
DB search
MENGGIEEADDALPVPTPLNGRRYRPVGSSDRAVIQMTSMEPGSSSAASIEAVVTPQPPR
NLKPDANLTIDPSMREGSPDDHAASGGSQGDSKLELFGFDSLVNILGLKSMTGEHIQAPS
SPRDGEDVAITIGRPKETGPKFGTMMGVFVPCLQNILGIIYYIRFTWIVGMAGVWQSLVL
VSFCGACTFLTGISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGSMY
VLGAVETFLDAVPSAGLFQKSVTVVNNTLVNGTETAGTSTISTPSLHDLQVYGVIVTILL
CFIVFGGVKIINKVAPAFLIPVLFSLLCIYLGVFIAPRHNAPKGITGLSITTFKDNWGSD
YQRTNNAGVPDPSGSIYWDFNALVGLFFPAVTGIMAGSNRSASLKDTQRSIPIGTLSATL
TTTAMYLFSVLLFGALATREELLTDRLLTATVAWPAPAVIYIGIILSTLGAALQSLTGAP
RLLAAIANDDILPVLNYFKVSEGSEPHAATLFTAFICVCCVVIGNLDLITPTITMFFLLC
YAGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLVGALLCVVIMFLISWSFTVVSLALASLI
YYYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGANQVHPKNWYPIPLIFCRPWGKLPENV
PCHPKLADFANCMKKKGRGMSIFVSIMDGDYHELAEDAKTACRQLDAYIDYKRCEGVAEI
IVAPTMSDGFRSIVQTMGLGNLKPNIVVMRYPEIWRRENLTQIPSTFVSIINYCIIANKA
VVIVKGLDEWPNEYQRQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCISEED
TDAEELKADVKKFLYDLRMQAEVIVVTMKSWESHMESSSTGAQQDDSHEAYTSAQQRIRT
YLDEMKETAQRERQPLMENGRQVVVNEQKVDKFLCTMLKLNSTILRYSRMAAVVLVSLPP
PPLNHPSYFYMEYMDLLVENVPRMLIVRGYTRDVVTFFT
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggagaacggtgggatcgaggaggcggacgacgcgctgccggtgcccacgccgctgaac
gggcggcggtaccggcctgtcgggtcgagcgaccgcgccgtcatccagatgacctccatg
gagccggggtcatcctccgccgcctccatcgaggccgtcgtgacgccccagcctccgagg
aatcttaaacctgatgctaatctaactattgatccaagcatgcgagaaggttctcctgat
gatcatgctgcatctggtggatctcaaggggattcaaagctagagctatttggttttgat
tctcttgtaaatatattgggcctcaagagcatgacaggagaacatattcaggccccttca
agtcctagggatggtgaggatgtagcaattaccattggacgccccaaggaaactggacct
aagttcggcaccatgatgggtgtctttgttccatgcttgcagaatatcttgggaatcatt
tattatatccgttttacctggattgtaggtatggcaggtgtatggcagtcgcttgtttta
gtttcattttgtggcgcttgcacatttttaactggaatatcattaagtgccattgcaact
aatggagcaatgaagggtggtgggccatattatcttataggccgtgcacttggtcctgaa
gttggagttagtattgggctatgcttcttccttgggaatgcagttgctggatccatgtat
gtgcttggggctgtagaaacttttcttgatgctgttccttctgctggacttttccaaaaa
agtgtgacagttgttaacaatacactagtaaatggtacagaaactgctggcacatctact
atatcaacacccagcttgcacgatcttcaagtgtatggtgtgattgtgaccatactgcta
tgctttattgtctttggtggtgtcaaaatcatcaacaaggttgcacctgctttcttaata
ccagttctgttttcgctactgtgcatctatcttggtgtcttcattgcaccaaggcataat
gctccaaagggaatcactgggttgagtataaccacatttaaagataattggggctcagat
tatcaacgtacaaacaatgctggtgttcctgatccaagtggatcaatatattgggatttc
aatgctttggtgggtctctttttcccagcagtgactggaataatggctggctcaaaccga
tctgcctcactgaaagatacacaacgttcaataccaatcggcacattatctgcaactctt
acaacaactgctatgtaccttttctctgtgcttctatttggagccttggccacaagggag
gagcttctaactgataggcttcttactgctacagtggcttggcctgctcctgcagtgatt
tacattggcattattctgtccactttaggtgcagctcttcagagtctgacaggggctcca
aggttacttgcagcgatagcgaacgatgatattcttccagttcttaattacttcaaagtt
tctgagggatctgaaccccatgcagccactttattcacagcattcatctgtgtttgctgt
gtggttattggaaacttggatttaattacacccactatcacaatgttttttcttctgtgc
tatgctggtgtgaacctgtcatgttttttgcttgacctccttgatgctcctagttggcgc
cctcgatggaaatttcaccattggagcctttcacttgttggtgcattgctttgtgttgtg
atcatgtttctgatctcatggtctttcactgttgtctcccttgcccttgcaagcctcatc
tattactatgtgagcataaaagggaaggctggagactggggagatgggttcaagagtgca
tactttcagttggcgctccgaagtctcagatcacttggagcaaaccaagtccatcctaag
aattggtaccccattcctttgatattctgccgtccatggggtaaacttccagaaaatgtt
ccttgtcatccaaaacttgcagactttgctaattgtatgaagaagaagggccgtggtatg
tcaatttttgtctcaataatggatggtgattatcatgaactggcagaggatgccaagact
gcatgccgtcaactggatgcttacattgactacaaacgctgtgagggtgttgcggagatc
attgtggctcccactatgtctgatggcttccgtagcattgtgcagaccatgggcctagga
aacttgaagccgaacattgttgtgatgcggtaccctgagatctggcgacgtgagaatttg
acacagataccgtcaacctttgtcagcataataaattattgcattattgctaacaaggca
gtagtcattgtgaaggggctcgatgagtggcctaatgagtaccagcgacagtatgggact
attgacctgtactggattgtaagagatggaggattgatgcttcttctgtcacagctcctg
ctcacaaaggagagctttgagagctgtaagatccaagtcttctgcatatctgaagaggac
actgatgcagaggagctgaaggcggatgtcaaaaagttcttgtacgatcttaggatgcaa
gctgaggtcatcgttgtgactatgaaatcatgggaatcacacatggagagcagcagcact
ggcgctcagcaggatgactcccatgaggcttacacaagcgcacagcaaaggatcaggacg
taccttgatgagatgaaggaaactgcacaaagagaaaggcagccactaatggagaatggg
aggcaagtcgttgtgaatgagcagaaggttgacaagttcctgtgcacaatgttgaagttg
aactccacgatactcagatactccagaatggcagccgtggtgcttgtgagcctgccccca
ccaccactaaatcatccttcgtatttctacatggagtacatggatttacttgtagagaat
gtcccacgcatgttaatagttaggggatacacaagagatgttgtcacatttttcacataa
DBGET
integrated database retrieval system
