Panicum virgatum (switchgrass): 120699034
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Entry
120699034 CDS
T07260
Name
(RefSeq) anaphase-promoting complex subunit 1-like isoform X1
KO
K03348
anaphase-promoting complex subunit 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120699034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120699034
03036 Chromosome and associated proteins [BR:
pvir03036
]
120699034
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
120699034
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
120699034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC1
Apc1_MidN
APC1_3rd
APC1_C
PC_rep
Motif
Other DBs
NCBI-GeneID:
120699034
NCBI-ProteinID:
XP_039838820
LinkDB
All DBs
Position
3K:complement(32831989..32877999)
Genome browser
AA seq
1817 aa
AA seq
DB search
MAPAIGSRRLTVLREFRPHGLAVEEADGEGAPGARSPQDYDYFLFDPALAASPVPDPGDG
ASVSGADGDHELFVRGNQIIWSSGSRVHKRYVSPNTVIMASWCRMDTISDALLCVLQVDT
LSLYNVTGEVVSIPLPYAVSSIWPLPFGLLLQKSTDGGRMVSSSSSLLNARDLNRPNKEY
GLTYNVSCQANTMETDSKANGAIISSHLILKHPLEEPQATYFEEKEKLTMMKDFDEKTIW
TSDTIPLMASYHKGKFQHSVWQIDGANYQEAMNENTMLPVSCDISSHKCTFRKIWQGKCP
QSAASKVFLATDFDGLPIICFLLHEQKILLAVRIQVDDTTEEAFGDIKSHMSWNIPAFAA
VPVVVTRPRVRVGVLPFTDILVLSSDNDLLLYSGKQCLCRYTLPTELGKGFFSNCGLNSV
ISDTYSDLKITSIADAVEGCINVTCNNGLMLRCSLRKNPSSSLVSDCINAMAEGLQSCFY
SHFVSLFWGDSDATYLYSNSHVDSEWEYFSYEIKRICTEYGQTLPTKSPILPSKAWDFLV
NSKYHAQYCKRAPTSYNSLLPVSYDTHKTIFNPQDEHSTDVSYYIRFMRETLETLHALYE
NLKLNILRKEDLGCLASLLCTIASSLGEHTYVDYYCRDFPLNLIEFPSLASTSLRTPPSL
FRWFEYCLHYGCDSAKLEDIPTLMRKQKVSALSWGRKVASFYSLLLGAERKGKKLSSGLY
CEVASGSARNIEELTVLAMVAEKFGRQQLDLLPVGVSLVLRHALDKCRDSPPDDWPATAY
VLVGREDLAMAKMGSARKDNGLWNNDNLTLMSVPYMLHLQPVTITTTASDIPISEVLNSE
DSDSVYKPIEDGMEHIFTSTTQLRFGHDLRLNEVRRLLCSARPVAIQTPTNPSVSDQDLQ
QQQLWNFAQRTTALPFGRGAFTLATTYTLLTEVLVFPKLVLAGRLPAQQNATVNLDLSSR
SVSEFKSWAEFHNGVAAGLRLAPFPEKMLRTWIQYNRPSEPNFTHAGLLLAFGLHEHLRV
LTMTDAYRYLSQEHDITTLGLLLGLAASHRGTMDPAISKMLYFHVPSRHPSSTPELELPT
LLQSAAVMGIGLLYESSAHALTMKILLGEIGRRSGGDNVLEREGYAVAAGSALGFVALGH
GSDAFGFMDTFLDRLFEYIGSKEVYHEKHLNATTADDQSGNTGQMMDGAQINVDVTAPGA
IIALALIFLKTESEEIAARLGIPNTFFDLQYVRPDFVMLRIIARNLILWSRIQPTKGWID
SQIPETVKTGVSNMSEGTIDSDEFDAEALFQAYVNIVTGACIALGLKYAGSRNGDAQELL
YAYTIHFLNEIKHIPVRTASILPKGLLQYVDRGTLELCLHLIVLSLSLVMAGSGNLQIFR
LLRYLRGRMSAEGQVNYGLQMAVSLAIGFLFLGGGTHTFSTQNSGIAALLISLYPRLPAG
PNDNRCHLQAFRHLYVIATEPRWVQTVDVDTELPVYCPLEVTVAETEYYDETNYCEVTPC
LLPERSVLKSIRVCGPRYWPQVIKLTPEDKPWWRSGDKTDPFNGGVLYIKRKVGSCSYSD
DPIGCQSLISRAMHEVCDMPSARCSNKPNSINHSANRIDQLVSTYSANPSLIAFAKLCSK
SWKNRCNFREFCSPVLYECMSKDRPSLLQVYISFYTIIESMWEHLKIGHFPFYDSLFLPN
LKLRPCSGSSRRARLHSFHGRAGMDASNRGAARRPPPCRRTSARLRPSITQPAAALSRLS
AAHLPAAPRVAKVELPFRLPRPSVAQPVVAPRRLRSTRLPAAPRVAEAELPARPCSLAWS
SDIFCLFSPTWIAIDTS
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagcgatcgggtcgcggcggctcacggtgctgcgggagttccggccgcacggg
cttgcggtcgaggaggccgacggcgagggagcccctggggcgcggtcgccgcaggactac
gactacttcctcttcgaccccgccctcgccgcttcccccgtcccagaccccggcgatggg
gcctcagtctccggcgcagacggcgaccacgagctcttcgtccgcggaaatcagataata
tggagcagtggttctcgagttcacaaaagatatgtatcaccaaatacagtcattatggct
tcctggtgtcggatggatacaatcagtgatgcccttctatgtgtgctgcaagttgatact
ttatctctatacaatgtaactggcgaagttgttagtattccactaccatatgccgtttca
tcaatatggccactcccctttggtcttctgcttcagaaatcaactgatggaggtcgtatg
gtgtcatcctcgagttcgctgctaaatgcaagggatttaaatcgtcctaacaaagaatat
ggattgacttacaatgtttcgtgccaagcaaacaccatggagacagacagcaaagctaat
ggagccattatctcatcacatctcattttgaaacatccacttgaagagcctcaggcaaca
tattttgaagaaaaggaaaaactaactatgatgaaagattttgatgaaaagacaatctgg
acaagtgatacaatacctctaatggcttcatatcataaagggaagtttcagcactctgtt
tggcaaattgatggtgcaaattaccaggaagcaatgaatgaaaatacaatgctacctgtc
tcatgtgatatttcttcacataaatgtacattccgtaagatatggcaagggaaatgcccc
caatctgctgctagtaaggtcttcttggcaactgattttgatggattgccaataatttgc
tttttactgcatgaacaaaaaatattgcttgctgtaaggattcaagttgatgataccact
gaagaagcttttggtgatattaagtctcacatgagctggaacattcctgcatttgctgct
gtgccagttgtcgtgactcgtccaagagtgcgggttggagtccttccctttacagatatc
ctcgttctgagttcggacaatgatctacttctctattctgggaagcagtgcctatgcaga
tatactctccctactgaattgggaaagggtttcttttctaattgcggcctaaattctgtg
atttcagatacttattctgatctgaaaatcacaagcatagctgatgctgttgaaggctgc
ataaatgtgacatgcaataatggtctgatgctcagatgttcgttgcgcaaaaatccttcc
tcttctctggttagtgactgcataaatgcaatggcagagggcttgcagagttgcttttac
agtcattttgtttctcttttttggggtgatagtgatgctacctacctatattcaaactct
cacgtggattcagaatgggaatattttagttatgaaataaaaagaatttgtacagaatat
ggacaaactttgccaactaagtcacccatattgccaagtaaagcttgggacttcctggtc
aacagcaaataccatgcgcaatactgcaaaagggctccaacctcttacaattcacttctg
cctgtttcatatgatacacacaaaactatctttaatccccaggatgagcatagtacagat
gtgtcatattatattcgttttatgagagaaacattggagacattgcatgccctatatgag
aacctgaagcttaacattttgcggaaagaggatctaggatgtcttgcttcattgttatgt
acaattgcatcatctctgggtgaacatacatatgttgattattattgccgtgactttcca
ctcaacttgattgaattcccttccctagcttcaacttctttaagaactccgccttctctg
tttcgctggtttgaatactgtctacattatggttgtgactcagcgaagctggaagacatt
cctactttaatgcgcaaacagaaagtttctgctttgagttggggtaggaaggtggcgtca
ttttatagtttgttgttaggagcagaaaggaaagggaaaaaactatcttcaggtttgtat
tgtgaggttgccagtggttcagccagaaacatcgaggaactaactgttctggctatggtt
gctgaaaaatttggtcgtcagcagttggacttgttaccagttggtgtatctcttgtgctt
cgccatgcactggacaaatgtcgtgactctcctcctgatgattggcctgccacagcttat
gttcttgttggcagggaagatctagctatggcaaagatggggtcagctaggaaagacaac
gggttgtggaacaatgataatttgacattaatgtcagtcccttatatgctacatctgcaa
cctgtaaccataacaacaactgcatctgacatccctatatcagaagttttgaattctgaa
gattccgattctgtctataaacctattgaggatggcatggaacatatcttcacttcaact
acacaactaagatttggtcatgatttgcgcttgaatgaggttagacgcctcttatgctca
gcaagacctgtggccatacaaacacctactaatcctagcgtgtcagatcaagacctacaa
cagcaacaattatggaattttgcacaaaggacaactgctttaccttttggacgtggggct
tttaccttagctacaacttatactttgttgacagaggttctggtgttcccaaagcttgtt
ttggctggtcgattgcccgcacagcagaacgcaacagttaatcttgacctaagtagtaga
agtgtctcagaattcaaatcttgggctgagtttcataatggtgtagctgctggcctgagg
cttgccccttttccggagaaaatgttgagaacttggatacaatacaatagaccttctgaa
ccaaattttactcatgctggtctgcttctagcatttggcttgcatgagcatctaagagtt
ttaaccatgactgatgcttatcgatatctctcacaggagcatgatataacaacacttggt
ttattgcttggtttggcagcatctcataggggaacaatggatcctgcaatatctaagatg
ctctactttcatgttccttctcggcatccatcttctacgccagagttggaattaccaact
cttctacagtcagcagcagtgatgggaattggacttctatatgaaagctcagcacatgcg
ctcaccatgaagatacttctgggtgagattggccgaagaagtggtggtgataatgtgcta
gaaagggaagggtatgccgtcgctgcaggttctgcattaggatttgttgcattgggtcat
ggcagcgatgcatttggattcatggatactttcctagatcgacttttcgaatatattggc
agcaaagaagtctaccatgaaaaacacctaaatgcaacaactgccgatgatcaaagtggc
aacactgggcagatgatggatggagcacaaataaatgttgatgttactgcacctggagca
ataattgctctggccttgatatttctgaagacagagtccgaggagattgcggctagactc
ggtatcccaaatactttcttcgatttgcagtatgtgagacctgattttgttatgcttcgc
attatagccaggaatttaatattgtggagcagaatacaacctaccaaaggatggattgat
tctcaaattcctgaaactgtaaagactggtgtttccaacatgagtgaagggactattgac
agtgatgaatttgatgccgaagctctttttcaagcttatgttaatatagtgactggagca
tgcattgcacttggactcaagtatgctggcagcagaaatggtgatgcccaagaactgctc
tacgcctatactatacattttctaaatgagattaagcacatacctgttcgaacagcaagt
atactgccaaagggattactacaatatgttgaccgtggaacccttgaactctgcttgcac
cttattgttctatctctatctctggtaatggcaggatcgggaaatttgcagattttccgc
ttactgcgttatcttagaggaagaatgtctgcagaaggacaagtgaattatggattacag
atggctgtaagcctggcgataggattcttattccttggaggcgggacacacactttttca
actcaaaatagtggaattgctgcattattgatctcactttacccacgtttgcctgctgga
cccaatgacaatcgctgtcatctccaggcattcagacacctatatgtaatagctacagag
cctcgatgggttcagacggtggatgttgatacagaacttccagtttattgcccattggaa
gtgacagttgctgaaacagagtattatgatgagaccaactattgtgaggtgacaccttgt
cttctgccagaacgctcagtgcttaagagcattcgagtttgtggacctagatattggcct
caggtgataaaacttacacctgaagacaagccatggtggagatccggagacaagacagat
cccttcaacgggggcgtactctacataaagcgaaaagttggatcatgctcctactctgat
gatccaattggctgccagtctttgatttcgcgggcaatgcatgaggtttgtgatatgcca
tctgctagatgcagtaataaaccaaacagcattaatcatagtgccaacagaattgatcag
cttgtaagcacttattcggccaatccaagcttgattgcttttgcaaaactgtgttccaag
tcatggaagaacagatgcaattttcgagagttctgctctccagtgctgtatgaatgtatg
agcaaagatagaccatcactgttacaggtatatatcagtttttacacaataattgagtca
atgtgggagcatttgaagattggacattttcccttctatgattcccttttccttcccaac
ttgaagctgcgcccctgtagcggatcgagccggcgtgcgcgcttgcactctttccatggt
cgagcaggtatggacgccagcaaccgcggagccgcgcgccgcccgcctccatgtcgtcga
acttcggctcgtctgcggccaagcatcacccagcccgcggcggcgctgtcgaggctgagc
gccgcccatctgcctgcagctccccgcgtcgccaaggttgagctcccattccgcttgccg
aggccaagcgtcgcccaacccgtggtggcgccgcggaggctgcgctccacccgtctgccc
gcggcccctcgcgtcgccgaggctgagctgcccgcccgcccgtgttcgcttgcttggtct
agcgacattttctgtctcttctctccgacgtggattgctatcgacacttcttaa
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