Panicum virgatum (switchgrass): 120699047
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Entry
120699047 CDS
T07260
Name
(RefSeq) SAGA-associated factor 11-like
KO
K11363
SAGA-associated factor 11
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120699047
03036 Chromosome and associated proteins [BR:
pvir03036
]
120699047
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
120699047
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
120699047
SLIK complex
120699047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sgf11
Motif
Other DBs
NCBI-GeneID:
120699047
NCBI-ProteinID:
XP_039838846
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All DBs
Position
3K:complement(33170825..33175708)
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AA seq
190 aa
AA seq
DB search
MSSSNDAPLSPRSQLALCCFEELLDCAVADVASECHRIARLGLDRSVDAEEEELRVWAAR
AAAGAEHHHPGGGGAAEEAGAGAGSKGGVDVFGQTHPAIAADVIKCMNCGRPVVAGRFAP
HLEKCMGKGRKARAKITRSSTAGRTRSSNGITASSYSPYSNAANTNRVNVPNGVTDGGCG
TGGDHSSHVP
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctccaacgacgctcccctgagccctcggtcccagctggcgctctgctgcttc
gaggagctcctcgactgcgcggtggcggacgtcgcgtcggagtgccaccgcatcgcgcgc
ctcggcctggaccgcagcgtcgacgccgaggaggaggagctccgcgtctgggccgcgcgc
gcggccgccggggccgaacaccaccaccccggcggcggcggggccgcagaggaggccggg
gccggggccgggagcaagggcggggtcgacgtgttcggccagacgcaccccgccatcgcc
gccgacgtcatcaagtgcatgaactgcggccgccccgtcgtcgcgggccgcttcgccccg
cacctcgagaagtgcatgggcaaggggcggaaagctcgagcgaaaattacaagaagcagt
acagctgggcggaccagaagcagcaatggcatcactgcttcatcctactctccatactcc
aatgcagccaacactaacagggtgaacgtccctaatggcgtgactgatggtggctgcggc
actggtggagatcacagcagccatgtgccatag
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integrated database retrieval system