Panicum virgatum (switchgrass): 120699172
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Entry
120699172 CDS
T07260
Name
(RefSeq) auxin response factor 14-like
KO
K14486
auxin response factor
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120699172
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GFIT
Motif
Pfam:
Auxin_resp
B3
Motif
Other DBs
NCBI-GeneID:
120699172
NCBI-ProteinID:
XP_039838996
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Position
3K:complement(40036043..40040984)
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AA seq
683 aa
AA seq
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MGIDLNAVEEDEPAGAAVCGELWHACAGAGVALPRRGSAVVYLPQAHLAEGGRGDGVEVP
AGAAARVPPHVACRVVDVELRADAATDEVYARLALVAEGKMFDQNTRDGETEEKNCEMED
GDGQKKLRTPHMFCKTLTTSDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHG
MKWRFRHIYRGQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGSDGELRLGVRRAVQLKNE
ALLEAVNSTDSKLRTLSAVASSLDNRSIFHISFNPRTGASEFIVPYCKFLKSLNCPFSIG
MKFKVGSENEDANQRSCGLISGISEVDSIGWPGSKWRCLQVKWDGDTNCSHQNRVSPWEI
ERVGSSISVPHCLSSSVSKRPKFYFTQGDLYAPILDGNGRPDSMETECFHRVLQGQELVR
SRTHGAACSHSSDIPKCQGSCERRFSDDLWNCKMNDAMSGLRQRNATGFAYQPLGFSESV
RFPEVLQGQEMSRVVPSFLGAAFGTRTQNGRIGSFDVQRSAGTQGYPLQQFNLLAREARS
PSSVPMVNQTMLLQPEVEGMANLEEANGSRYAPIATQREDETWPSAQQQRASENGSELFN
TTEASAYAAAAKSGLADKGVRRSSCRLFGFSLTDEILGAEDDGVKENYEAAPQTPRVLDL
FGHSQSTPSALPLHAPCAAPLGI
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggggatcgatctcaacgccgtggaggaggacgagccggcgggggcagcggtgtgcggg
gagctgtggcacgcgtgcgcgggggcgggggtggcgctgccgcggcggggcagcgccgtc
gtgtacctgccgcaggcgcacctcgcggagggcggccgcggcgacggcgtggaggtgccg
gccggtgccgcggcgcgcgtgccgccgcatgtggcgtgccgcgtcgtcgacgtcgagcta
cgcgcggatgcggcgacggatgaggtgtatgcgcggctcgcgctggttgcggagggcaag
atgtttgaccaaaatactcgtgatggtgaaactgaagagaagaactgtgagatggaggat
ggtgatggacaaaagaagctacgaacaccgcacatgttctgcaagacactcacaacttcg
gatacaagcacacatggagggttttctgttcctcggcgggctgctgaggattgctttcca
ccattggactatgagcagcttaggccatctcaagagctcattgccaaggatttacacggc
atgaaatggaggttccgacatatctatagaggtcaaccacgtaggcatcttttgacaact
ggatggagttcatttatcaataagaagaaattagtctcaggggacgcagtcttgtttctt
agaggtagtgatggtgagctaagattgggtgtgaggagagcagttcaactaaaaaatgaa
gctcttcttgaagctgttaacagtactgattcaaagctacgtacactgtctgctgtggcc
agttccttggataacagaagtatatttcacatttctttcaacccaaggactggtgcttca
gaatttattgtgccgtattgcaaattcttgaagagcttgaactgtcccttttcgattggg
atgaagtttaaagttggcagtgagaatgaagatgctaaccagaggtcttgtggattgatc
tcaggtatcagcgaagttgattccataggctggcctggatcaaaatggagatgtctccag
gttaaatgggatggtgatactaactgcagccaccagaatagagtatctccatgggagatc
gagagagttggcagctcaatttcagttccccattgtctttcatcatctgtatcaaagcga
ccaaaattttactttactcaaggtgatttgtacgctcctattctagatggaaatggtcgt
cccgactccatggaaactgaatgtttccatcgggtcttgcaaggtcaagaattggtgcgc
tccaggactcacggtgctgcatgctctcattcatcagatatccccaaatgtcaaggctcg
tgtgaaaggagattctctgatgatttgtggaactgcaagatgaatgatgcaatgagtggg
ctccggcagcgaaatgccactgggtttgcttaccagcccctaggcttcagtgaatctgtt
agattcccagaggtcttgcaaggtcaagaaatgtctcgggtggttccttctttccttgga
gctgctttcggtactcgcacacagaatggcagaattggctcgtttgatgtgcagagatca
gctggaactcaaggatatccgctccagcagtttaatctgctagcaagagaagcgcgttca
ccctcttctgttcctatggttaaccaaaccatgttgctacagcctgaggtagaaggtatg
gccaaccttgaagaagcaaatggcagccgatacgcccccatcgcaacacagagagaagat
gaaacctggccatctgcgcagcagcaaagggctagtgaaaatggaagcgagcttttcaac
acaactgaagcctcagcttatgctgctgctgctaaatctggattagctgataagggagtt
aggcgaagcagctgcaggctttttggtttctccttgaccgacgagatcctgggagcagag
gacgatggtgtgaaggaaaactacgaagcggctccgcaaactccccgcgttctggacttg
tttggacacagccaatctacacccagtgctctgcctctgcatgctccgtgtgctgctccc
ttgggaatttga
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