Panicum virgatum (switchgrass): 120699273
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Entry
120699273 CDS
T07260
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120699273
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120699273
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120699273
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
zf-C3HC4
vWA-TerF-like
zf-C3HC4_2
Sina_RING
zf-RING_2
zf-RING_5
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
120699273
NCBI-ProteinID:
XP_039839150
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Position
3K:complement(44247116..44258918)
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AA seq
528 aa
AA seq
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MSGFLAVAGKIGTFLLWVLFLVLQTATRIVGSLLAGPAERQEDPLQESAAAARRRSPPAS
PRRDPYEPASAPPQQLWGPPPLPYSPSAPAADEYSSSSSFRRRSAPPPLPSEDVVAHAHS
VSAPPLRAIETRAVPARAVAAGGRRPRLERKYSKIVDQYRSLDEVIEALAQAGLESSNLI
IGIDFTKSNEWTGKNSFNGMSLHHIGDTPNPYEQAISIIGQTLSAFDEDNLIPCYGFGDA
STHDQDVFAFYPDERPCNGFQEALARYREIVPHLRLSGPTSFAPIIEMATTIVERSGGQY
HVLVIIADGQVTRSVDTEFGQLSTQEQMTVDAIVQASEFPLSIILVGVGDGPWDMMKEFD
DNIPARSFDNFQFVNFTAIMSKKISQSKKETEFALSALMEIPLQYKATLELGILGRRLVK
SPERVPLPPPFASYSTVSRAAPSRANSYRSVPSRPREEPTVDSTITASVTSPPAVETRVS
EPLMCPVCLSKPRDMAFGCGHQTCSECGPQVADCPICRRPIDTRVKLY
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcttcttggctgtggccggtaagatcggcaccttcctgctttgggtgctcttc
ctggtgctgcaaacggccacccggatcgtcggcagcctcctcgctgggccagccgagcgg
caggaggacccgctgcaagagtcggcggcggcagcgcgccgcaggtcgccgccagcctcg
ccgcgccgcgacccctacgagccggcgtctgcgccgcctcagcagctctggggcccgcct
ccgctgccgtactctccctctgctcccgcggcggatgagtactcctcgtcctcgagcttc
cggcggcggagcgcgccgccgccgctgccgtctgaggacgtagtggcccatgcgcattcc
gtgtcggcgcctccgctgagggcaatcgagacgcgggcggtgccagcgagggcggtggct
gctgggggtaggcggcccaggctggagaggaagtactccaagattgttgaccagtaccgc
tccctggatgaggttattgaagcattagcacaagctggtctggagtcttccaatttaatc
ataggaattgatttcacaaagagtaatgaatggacaggaaagaattccttcaatggtatg
agcctgcatcatattggtgacaccccaaatccttatgaacaggcaatatcgatcattggg
caaaccttatcagcatttgatgaggataatttaattccttgctatggttttggagatgca
tctacacatgaccaagatgtatttgccttttatcctgatgaaagaccatgcaatggtttt
caggaagctttagctcgatacagagaaattgttcctcaccttcgcctttctggtcctaca
tcattcgctccaataattgaaatggctacaaccattgttgagcgaagtggtggccaatac
catgttttagtaatcatcgctgatgggcaggtcacacgaagtgtagataccgaatttggt
cagttaagtacccaggagcaaatgacagttgatgctattgtacaagccagcgaatttccc
ttgtccataattctcgttggagttggagatggtccatgggatatgatgaaggaatttgat
gacaacataccagctaggtcttttgacaatttccagtttgtcaacttcactgcgatcatg
tcaaaaaagataagtcaaagcaaaaaggagacagagtttgccctttcagcactcatggaa
attccgttgcagtacaaggcaacattagagcttggaattttaggacgtcgacttgtaaag
tcgcccgagcgagttccacttcctcctccttttgcaagttatagcacagtttcaagagca
gcaccatctcgggcaaatagctatcgaagcgtgccttcacgtcctagagaggagccaact
gtagattcaacaatcacagcatcagtcacatccccaccagctgttgaaactagagtttca
gaacccctgatgtgcccagtttgcctttccaaaccccgggacatggcatttggttgtggc
caccagacatgctcggaatgtggaccacaagtcgcagattgtccaatctgtcgaaggccc
attgatacgagagtaaaattgtactag
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