Panicum virgatum (switchgrass): 120699286
Help
Entry
120699286 CDS
T07260
Name
(RefSeq) WD repeat-containing protein GTS1-like isoform X1
KO
K24758
WD repeat-containing protein 89
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
120699286
Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
120699286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
WDR55
Beta-prop_EML
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_NUP159_NUP214
B-prop_COPA_B_2nd
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
120699286
NCBI-ProteinID:
XP_039839175
LinkDB
All DBs
Position
3K:44540817..44548675
Genome browser
AA seq
406 aa
AA seq
DB search
MDGYGEAAMEVEAEASPCAGLSSPVTSDSPPRNPDGSVTSRRLGLKNSIQTNFGDDYVFE
IASCQEISTLAVSLSTNALKFYSPATGQYLGECKGHEGTIHEISFSVPSSPQVICSCSSD
GTIRAWDTRNFKQISLLRGGASQEMFSFAFGGSSGNLLAAGSNAQVLLWDWRNSKQVACL
EESHMDDVTQVKFAPNQQSKLISTAMDGLLCVFDTDGDIDEDNHLLSVMNAETSVAKVGF
FGNMYQKLWCLTHIETISVWDWNDGSRELNIEDARSLATDKWNLDHVDYFVDCHYSLPDD
RLWLIGGTSAGTLGYFPVRNDLAGAIGPAEAILEGGHTGVVRTVYPAAGTHWSLGQNRGI
FGWTGGEDGRLCCWRSDEIAETNKSWISSSLVSKLQKKTKIRHQPY
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggatggatacggagaggcggccatggaggtggaggccgaggccagtccgtgcgcgggg
ctctcctctcctgtgacgtcagattccccaccccgaaaccctgatggaagcgtgacctcg
aggcggctcggcctcaagaacagcatccagaccaatttcggagatgattatgtcttcgaa
attgcttcttgccaggagatctcaacactcgcagtttccttgtcaacaaatgcgctgaag
ttttattctccagcaactggacaatatctgggggaatgtaaaggacatgaaggaaccatt
catgaaatctccttctcagttccatcatcaccacaagtaatctgttcttgttcttctgat
ggaactatcagagcgtgggatacaagaaactttaagcagatatcactgctaagaggaggc
gcatcacaagaaatgttttccttcgcttttggtggatcaagtggtaacctacttgctgct
ggctctaatgcccaggttctattgtgggattggagaaattcaaaacaagttgcatgctta
gaggaaagccacatggatgatgtgacacaagtcaaatttgcaccaaatcaacagagcaaa
ctcatttctactgcaatggatggattattatgtgtttttgacactgatggcgacattgat
gaggacaatcatctgctatctgttatgaatgcagaaacatctgttgcgaaagtggggttt
tttggaaatatgtatcagaagctttggtgtttgacccatattgagacaataagcgtttgg
gactggaatgacgggtctagagagttgaatattgaagatgctcgctccttggccactgat
aagtggaaccttgaccatgttgactactttgttgattgtcattactctctgcctgatgac
cggctatggttgattggcggcacaagcgcagggactctaggttacttccctgtaagaaat
gatcttgcaggagcaataggtcccgctgaagctatccttgaaggaggccatacaggggtt
gttaggaccgtgtaccctgccgcaggaacccattggagccttgggcaaaataggggcatc
tttggatggacaggaggtgaggatggccgtttgtgctgctggcgctccgacgaaattgca
gagacaaacaagtcttggatctcgagttctttagtctcgaagctgcaaaagaaaaccaaa
atccgacatcagccatactag
DBGET
integrated database retrieval system
