KEGG   Panicum virgatum (switchgrass): 120699310
Entry
120699310         CDS       T07260                                 
Name
(RefSeq) serine hydroxymethyltransferase 4-like
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00260  Glycine, serine and threonine metabolism
pvir00460  Cyanoamino acid metabolism
pvir00630  Glyoxylate and dicarboxylate metabolism
pvir00670  One carbon pool by folate
pvir01100  Metabolic pathways
pvir01110  Biosynthesis of secondary metabolites
pvir01200  Carbon metabolism
pvir01230  Biosynthesis of amino acids
pvir01240  Biosynthesis of cofactors
pvir04981  Folate transport and metabolism
Module
pvir_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    120699310
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    120699310
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    120699310
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    120699310
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    120699310
Enzymes [BR:pvir01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     120699310
SSDB
Motif
Pfam: SHMT Dak1 BRCA2
Other DBs
NCBI-GeneID: 120699310
NCBI-ProteinID: XP_039839207
LinkDB
Position
3K:44911472..44915506
AA seq 605 aa
MSSRDIPNRVALYIQDPGNPQRRGPAQASAHSPPHPSHSLPTSTRAAIRRGIPPSTSRAR
MAAMAPHHLSRPAAAAAATAAASGAVSGALSRHRAFPSTSCSPLRLPLLRAAAARPARLS
AAVSTAAPTMEAAAMDAVAKWGLTPLSEADPEVYDLIEREKRRQRAGIELIASENFTSLA
VMEALGSPLTNKYSEGMPGARYYGGNEVIDEVEELCRARALAAFHLDPARWGVNVQPYSG
SPANFAAYTGLLQPHDRIMGLDLPSGGHLTHGYYTAGGKKISATSIYFESLPYKVSSDNG
YVDYDKLEEKAMDFRPKLIICGGSAYPRDWDYARLRAIADKCGAMLLCDMAHISGLVAAQ
EALNPFEYSDVVTTTTHKSLRGPRSGMIFFRKGPKPPKKGQPEGALYDYEDKINFAVFPS
LQGGPHNHQIAALAVALKQAMSPGFKAYIQQVKANAVALGNHLMSKGYKLVTDGTENHLV
LWDLRPLGLTGNKVELLCDLCSITLNKNAVFGDSSALSPGGVRIGTPAMTSRGLVEKDFV
QIAEYLHQAVTICLNVQEEHGKILKDFKKGLVNNQDIETLRAEVEKFATSFEMPGFRVSD
MKYKD
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgagcagccgcgacatccccaaccgcgtcgcgttatatatacaagacccggggaacccg
cagcgccgcggcccagcccaagcatcggcccattcgcccccacacccgtcacactccctc
cccacctccacccgcgccgccatccgccgcggcattccaccgagcacctcgcgcgcgcgc
atggccgccatggccccgcaccacctctcccgccccgccgccgccgcggccgccaccgcc
gcggcatccggcgccgtgtctggtgctctcagcaggcaccgcgccttcccatccacctcc
tgctcccctctccgcctcccgctcctccgcgccgccgccgccaggcccgcgcgcctctcc
gccgcggtttccaccgccgccccgaccatggaggccgcggcgatggacgccgtggccaag
tgggggctcaccccgctctccgaggccgacccggaggtctacgacctcatcgagcgcgag
aagcgccggcagcgcgcgggcatcgagctcatcgcctccgagaacttcacctcgctcgcc
gtcatggaggcgctcggctccccgctcaccaacaagtactcggagggcatgccgggggcg
cgctactacggcggcaacgaggtcatcgacgaggtcgaggagctctgccgcgcccgcgcg
ctcgccgcgttccacctcgacccggcgcgctggggcgtcaacgtgcagccctactcgggc
tcgccggccaacttcgccgcctacacggggctgctccagccacacgataggatcatgggg
ctcgacctgccgtcgggtggccacctcacccatgggtactacacggccggcggcaagaag
atttcggccacgtccatctacttcgagagcctgccgtacaaggtcagctccgacaacggg
tacgtcgactacgacaagctggaggagaaggccatggatttccgccccaagctcattata
tgcggtgggagcgcgtacccgcgggactgggattacgccaggctcagggccatcgcagac
aagtgcggcgccatgctgctatgcgacatggctcatatcagtggtctcgtggccgctcag
gaggctttgaatccctttgagtactctgatgtggttaccacaaccacacacaagagtctt
cgagggccaagatctggtatgatcttcttcaggaagggcccaaagcctccgaagaaaggc
cagcccgagggtgctctgtatgactatgaggacaagatcaactttgcagtattcccttca
ctccaggggggtcctcacaatcaccagattgctgcactggctgtagccttgaagcaggcc
atgtcacctggattcaaggcctatatccagcaggttaaggcaaatgcagttgcccttgga
aaccatttgatgagcaagggctacaagttggttactgatggaacagagaaccaccttgtt
ctctgggatctccgtcctcttggcttgactggtaataaagtcgagttgctctgcgaccta
tgcagcattacactgaacaaaaatgctgtcttcggtgacagtagtgcattatcacctggc
ggcgtacgcattggtacacctgcaatgacctccaggggtttggttgagaaggactttgtg
caaattgctgagtaccttcaccaggcggtgaccatctgcttgaatgtccaggaggagcat
ggcaagattctcaaggacttcaagaagggattggtgaacaaccaggatattgaaacccta
agggccgaggttgagaagttcgccacatcgtttgagatgcctggcttcagggtgtcagac
atgaagtacaaggattag

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