Panicum virgatum (switchgrass): 120699354
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Entry
120699354 CDS
T07260
Name
(RefSeq) proline--tRNA ligase, cytoplasmic-like
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120699354
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvir01007
]
120699354
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120699354
Enzymes [BR:
pvir01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
120699354
Amino acid related enzymes [BR:
pvir01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
120699354
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
120699354
Prokaryotic type
120699354
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ProRS-C_1
HGTP_anticodon
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
120699354
NCBI-ProteinID:
XP_039839257
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Position
3K:complement(46365598..46373591)
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AA seq
506 aa
AA seq
DB search
MSSGGGKGGGGGKKKEVKKETKLGMAYKKDENFGEWYSEVVVNSEMIEYYDISGCYILRP
WAMEIWELLKEFFDAEIKKLKLKPYYFPLFVTENVLQKEKDHIEGFAPEVAWVTKSGKSE
LEAPIAIRPTSETVMYPYFSKWIRSHRDLPLRCNQWCNVVRWEFSNPTPFIRSREFLWQE
GHTAFATKEEADKEVLQILELYRRIYEEFLAVPVSKGRKSEMEKFAGGLYTTSVEAFIPN
TGRGIQGATSHCLGQNFAKMFDITFENEKGAREMVWQNSWAYTTRSIGVMVMTHGDDKGL
VLPPRVAPIQVIVIPVPYKDSDTTAIKGACESTVYTLNESGFRADLDTRENYSPGWKYSH
WEMKGVPLRIEIGPRDLANQQVRVVRRDNGAKVDIPVANLVEEVKVLLDEIQANLLKTAK
EKRDACIEVIHTWDEFTTALNNKRLILAPWCDEEEVEKDVKARTKGDLGAAKTLCTPFDQ
PELPEGTLCFASGKPAKKWSFWGRSY
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccggcggaggcaagggcggcggaggggggaagaagaaggaggttaagaaggag
acgaagctcgggatggcgtacaagaaggacgaaaacttcggggagtggtactccgaggtt
gttgttaacagtgaaatgatcgagtactatgacatctcgggttgttatatactgaggcca
tgggcgatggaaatctgggagctgctgaaagaattctttgatgcagaaattaaaaagctg
aagctcaaaccatattatttccctttgtttgttactgagaatgttctacagaaggagaag
gaccacattgagggctttgcacctgaggtagcttgggtgactaaatcagggaaatctgag
ctggaagctcctattgcaatccgccccacaagcgagactgtcatgtatccttacttctct
aaatggataagaagccaccgtgacttacctttgaggtgtaaccagtggtgtaatgttgtt
agatgggagtttagcaatcctactcctttcataaggagccgtgagtttctgtggcaagaa
gggcatacagcttttgcaactaaagaagaggcagacaaagaggttctacaaatattggaa
ctgtacagaaggatatatgaagaatttttagcagttccagtgtccaaagggaggaaaagt
gagatggaaaaatttgcaggtggactctataccaccagtgttgaggctttcattccaaac
actggtcgtggtatacaaggtgcaacctcacattgtcttggccaaaacttcgccaagatg
tttgatattacttttgagaatgagaagggtgcaagggaaatggtttggcaaaactcttgg
gcatatacaactcgctcgattggagtgatggtgatgacacacggtgatgacaaaggctta
gtattaccaccaagggtggcaccaatccaggtaattgtgattccagtgccttacaaggat
tctgacacaactgccataaagggagcttgcgaatcaactgtttacactctcaatgagtct
ggattccgagcggatttggacacccgcgaaaattactctccaggttggaagtattctcac
tgggaaatgaaaggtgttcctttgagaattgagattgggccaagagatctggccaaccaa
caggtgcgcgttgtccgccgagacaatggtgcaaaggttgatattcctgtggccaattta
gttgaggaggttaaagtattgctggatgagatccaagcaaaccttctcaaaacagccaaa
gaaaagagagatgcctgcattgaagtcatccacacctgggatgaattcacaactgctctg
aacaacaaaaggttgatcttggctccatggtgtgatgaggaggaagttgagaaagatgtg
aaagctcggaccaagggggacctcggagctgcaaaaacattgtgtactccattcgatcag
ccagaacttccagaaggaaccctgtgcttcgcctctggaaagccagcaaagaagtggtcg
ttctggggccgcagctactga
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