Panicum virgatum (switchgrass): 120699361
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Entry
120699361 CDS
T07260
Name
(RefSeq) chloride channel protein CLC-a-like
KO
K05016
chloride channel 7
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120699361
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120699361
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvir04040
]
120699361
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120699361
Membrane trafficking [BR:
pvir04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
120699361
Ion channels [BR:
pvir04040
]
Chloride channels
Chloride channel (CLC)
120699361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
120699361
NCBI-ProteinID:
XP_039839274
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All DBs
Position
3K:complement(46594456..46597848)
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AA seq
798 aa
AA seq
DB search
MEEERSTRAAGEPAAEPGPAPELKRKNEDGVQDPEDPESTGTGDGGNGISSLEQPLLKRS
ATLTASHLALVGAKVSHIESLDYEIIENDLFKHDWRSRSNVEVLQYIFLKWAMAFLVGLL
TGVIASLINLAIENITGLKMLRMVTLVRERRYWAGFLYFAGVNLGLTFVAAALCVVFAPT
AAGPGIPEIKAYLNGVDTPNMFGAPQLIVKIVGSIGAVSSGMDLGKEGPLVHIGACLANL
LSQGGEGRWRLRWRWLRFFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFALEEVATWWR
SALLWRTFFSTATVVVVLRGFIEVCRNGRCGMFGEGGLILFDVSGVTVRYHAGDLLPVTL
VGVLGGLFGALYNHVLHQVLRLYNLINARGRLAKLALALAVSVLTSAGLYLLPFAVPCTP
CSAAGAAAASCPTVGKSGNFKQFNCPDGFYNDLASLLHATNTDATRNIFSTGTAGEFRLD
SLLIFFAIYCVLGLLTFGIAVPSGLFLPIILMGSAYGRIAALVLARFVRIDHGLYAVLGA
AALMSGSMRMTVSLCVIFLELTNNLLLLPITMFVLLIAKTVGDAFNPSIYEIILDLKGLP
FLEPKPETWMKDIAVGELAAAKPRAVTLQVVERVSTVVEVLRSTPHNGFPVLDRPRPGVS
ELHGLVLRSHLMAVLRKRWFLPERRRTEEWEAREKFSSTGLAEKAGSVDELQLSPEELDM
YIDLHPFTNTTPYTVVETMSVAKAVVLFRTCALRHMLIIPKFQGLEISPIVGILTRQDLR
AHNILGAFPLLANKRKVH
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagcggagcacgagggccgccggcgagccggcggcggagcccggcccggcg
ccggagctgaagcgtaagaatgaggacggcgtgcaagacccggaagacccagagagcacc
ggcaccggcgacggcgggaacggcatcagctccctggagcagccgctgctgaagcggagc
gccaccctgacggccagccacctcgccctcgtcggcgccaaggtctcccacatcgagagc
ctcgattacgagatcatcgagaacgacctgttcaagcacgactggcggagccggtccaat
gtggaggtgctgcagtacatcttcctcaagtgggcgatggcgttcctcgtcgggctcctc
accggcgtcatcgcgtcgctcatcaacctcgccatcgagaacatcaccggcctcaagatg
ctccggatggtcaccctcgtccgcgagcggcgctactgggcgggcttcctctacttcgcc
ggcgtcaacctgggcctcaccttcgtcgccgccgcgctctgcgtcgtcttcgcccccacc
gccgccggccccggcatccccgagatcaaggcctacctcaacggcgtcgacacgcccaac
atgttcggcgcgccgcagctcatcgtcaagatcgtcggcagcatcggcgccgtgtcgtcg
gggatggacctcggcaaggaggggcccctggtccacatcggcgcctgcctcgccaacctc
ctcagccagggcggcgagggccggtggcgcctccgctggcggtggctgcgcttcttcaac
aacgaccgcgaccgccgcgacctcatcacctgcggcgcctcgtcgggggtgtgcgcggcg
ttccgggcccccgtcggcggcgtgctcttcgcgctggaggaggtggccacctggtggcgg
agcgcgctgctgtggcgcaccttcttcagcacggccaccgtcgtcgtcgtcctccgcggc
ttcatcgaggtgtgccgcaacgggcgctgcggcatgttcggcgagggcgggctcatcctc
ttcgacgtcagcggcgtcaccgtccgctaccacgccggcgacctcctccccgtcacgctc
gtcggcgtcctcggcggcctcttcggcgcgctctacaaccacgtcctccaccaggtgctc
cgcctctacaacctcatcaacgcccggggccgcctcgccaagctcgcgctcgcgctcgcc
gtctccgtcctcacctccgccggcctctacctcctccccttcgccgtgccctgcacgccc
tgctccgccgccggcgccgccgccgcctcctgcccgaccgtcggcaagtccggcaacttc
aagcagttcaactgccccgacgggttctacaacgacctggcgtcgctgctgcacgccacc
aacaccgacgccacccgcaacatcttctccacgggcaccgccggcgagttccgcctcgac
tcgctgctcatcttcttcgccatctactgcgtgctggggctcctcaccttcggcatcgcc
gtcccctcgggcctcttcctgcccatcatcctcatgggctccgcctacggccgcatcgcg
gcgctggtgctggcgcgcttcgtccgcatcgaccacggcctctacgccgtgctcggcgcc
gccgcgctcatgtcggggtccatgcggatgaccgtctcgctctgcgtcatcttcctcgag
ctcaccaacaacctgctcctcctccccatcaccatgttcgtgctgctcatcgccaagacc
gtcggcgacgccttcaaccccagcatctacgagatcatcctcgacctcaagggcctgccg
ttcctcgagcccaagccggagacgtggatgaaggacatcgccgtcggcgagctcgccgcc
gccaagccgcgcgccgtcacgctccaggtcgtcgagagggtgtccaccgtcgtcgaggtg
ctgcgctccacgccgcacaacggcttccccgtgctcgaccgcccgcgccccggcgtgtcg
gagctgcacgggctggtgctccggagccacctcatggccgtgctcaggaagcgctggttc
ctgccggagaggaggaggacggaggagtgggaggccagggagaaattctcgtcgacgggg
ctcgccgagaaggccggcagcgtcgacgagctgcagctgtcgccggaggagctggacatg
tacattgacctccacccgttcaccaacaccacgccctacaccgtcgtggagaccatgtcc
gtggccaaggccgtcgtgctcttccgcacctgcgcgctccgccacatgctcatcatccca
aagttccagggcctcgagatctctccgatcgtggggatcctgacaaggcaggatctgagg
gcgcacaacatccttggcgccttcccccttctggccaacaaaaggaaagtgcactga
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