Panicum virgatum (switchgrass): 120699495
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Entry
120699495 CDS
T07260
Name
(RefSeq) calcium-dependent protein kinase 27-like
KO
K13412
calcium-dependent protein kinase [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120699495
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120699495
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120699495
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120699495
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: CAMK group
CDPK family
120699495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
EF-hand_1
EF-hand_7
PK_Tyr_Ser-Thr
EF-hand_6
EF-hand_5
EF-hand_8
AIF-1
EH
EF-hand_9
EF_EFCAB10_C
DUF5580_M
APH
SPARC_Ca_bdg
Kinase-like
Kdo
EFhand_Ca_insen
RNA_ligase
tRNA_synt_1c_R1
Motif
Other DBs
NCBI-GeneID:
120699495
NCBI-ProteinID:
XP_039839430
LinkDB
All DBs
Position
3K:50868518..50871268
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AA seq
691 aa
AA seq
DB search
MHAIFSSSFRSSIVSDPFRQTTSTTQFPALIVPRRNAPRSAAAVPCACRRCGGRSTGGEA
ATTPQEALIAVAAAARPMGNVCVGNRFSKNRFFGHFSLWPARSRSTGTPSNPTTTSRSVP
VVQVQPSESDAKPSPPPPTAAPAPIVISEPGPAPLPQPQPTPPPPSQPDPSPPPASQSQP
PQPQQPPPQARQQSRKKAAHIKRISSAGLQVESVLRRKTENLKDKYSLGRKLGQGQFGTT
YLCVDKGNGREYACKSIAKRKLVTDEDVEDVRREIQIMHHLAGHPNIIAIRGAYEDAVAV
HVVMELCAGGELFDRIVRRGHYTERQAAELARVIVAVVESCHSLGVMHRDLKPENFLFIG
NDEDSPLKTIDFGLSMFFRPGEEFTDVVGSPYYVAPEVLKKHYGQEADVWSAGVIIYILL
CGVPPFWAETEQGIFEQVLHGSLDFDSDPWPSVSDNAKDLLRRVLIRDPSKRLTAHQVLC
HPWLQTIGSVPDKPLDSAVLSRLKQFSAMNKLKKMALRVIAENLSEEEIAGLKEMFKMMD
TDNSGQINFEELKAGLERVGANMKESEIYQLMQAADIDNSGTIDYGEFIAATLHLNKVEK
EDHLFAAFQYFDKDGSGYITADELQQACDEFGIEDVRLEDMIGEVDQDNDGRIDYNEFVA
MMQKSTGGFGKKGHQYNLSIGFRDALKQAHS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcacgccatttttagctcctcgtttcgctcctcaatcgtctccgatcccttccgacaa
accacgagcaccacccagttcccagctctgatcgtcccccggcggaacgcgccccgttcc
gccgctgcagtgccatgcgcctgccgccgctgcggaggacgaagcacgggaggagaggca
gcgaccacaccgcaggaggctctgatcgccgtcgccgccgcagcccgcccgatgggcaac
gtctgcgtcggcaaccgcttctccaagaaccgcttcttcggccacttctcgctctggccc
gcgcgctcccgctccacgggcacgccctccaaccctaccaccacctcccgctctgtcccc
gtcgtccaggtccagcccagcgagtccgacgccaagccgtccccgccgccgccgaccgcc
gctccagcccccatcgtcatctccgagccgggaccggcgccccttccccagccgcagccg
acaccgccgccgcccagccaacccgacccgtcaccgcccccagcgtcacaatcacaacca
ccgcagccgcagcagccgccgccgcaggcccggcagcagtcgcggaagaaggcggcgcac
atcaagcgcatctccagcgccgggctgcaggtggagtcggttctccggcgcaagaccgag
aacctcaaggacaagtacagcctgggtcgaaagctcgggcaggggcagttcggcacgacg
tacctgtgcgtcgacaagggcaacggccgggagtacgcgtgcaagtccatcgccaagcgg
aagctggtgaccgacgaggacgtggaggacgtgcggcgggagatccagatcatgcaccac
ctggcggggcaccccaacatcatcgccatccgcggcgcgtacgaggacgccgtcgcggtg
cacgtggtcatggagctctgcgccggcggcgagctcttcgaccgcatcgtgcgccggggc
cactacacggagcggcaggcggccgagctggccagggtcatcgtcgccgtcgtcgagtcg
tgccactcgctcggggtcatgcaccgcgacctcaagcccgagaacttcctcttcatcggc
aacgacgaggactcgccgctcaagaccatcgacttcggcctctccatgttcttccgacca
ggcgaggagttcacggacgtggtggggagcccgtactacgtggcgccggaggtcctgaag
aagcactacgggcaggaggcggacgtgtggagcgcgggcgtgatcatctacatcctgctc
tgcggcgtgccgcccttctgggcggagacggagcagggcatcttcgagcaggtgctgcac
ggctcgctggacttcgactccgacccgtggcccagcgtctccgacaacgccaaggacctg
ctccgccgggtgctcatcagggaccccagcaagcgcctcaccgcgcaccaagtcctctgc
cacccgtggctgcagaccatcggctcggtgccggacaagccgctggactcggcggtgctc
tcacggctgaagcagttctcggccatgaacaagctcaagaagatggccctgagggtgatc
gccgagaacctgtcggaggaggagatcgccgggctcaaggagatgttcaagatgatggac
accgacaacagcgggcagatcaacttcgaggagctcaaagctggacttgagagggtcgga
gccaacatgaaggagtcggagatctatcagctcatgcaggctgctgacattgacaacagt
ggcaccatagattacggagagttcatagcagccacgctgcacctcaacaaagttgaaaag
gaggaccatcttttcgccgccttccagtacttcgacaaagatggcagtggatacatcacg
gctgatgagctgcagcaagcgtgcgacgagttcggcatagaagatgtccggcttgaagac
atgatcggcgaagtggatcaagacaacgatgggcgcatagattacaatgagtttgttgcg
atgatgcagaaatcgactggcggctttggcaagaaaggccaccagtacaaccttagcatt
gggtttagggatgccttgaagcaggcacatagctga
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