KEGG   Panicum virgatum (switchgrass): 120699555
Entry
120699555         CDS       T07260                                 
Name
(RefSeq) DNAJ protein JJJ1 homolog
  KO
K09506  DnaJ homolog subfamily A member 5
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pvir03009]
    120699555
   03110 Chaperones and folding catalysts [BR:pvir03110]
    120699555
Ribosome biogenesis [BR:pvir03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    120699555
Chaperones and folding catalysts [BR:pvir03110]
 Heat shock proteins
  HSP40 / DNAJ
   120699555
SSDB
Motif
Pfam: DnaJ ZUO1-like_ZHD zf-C2H2_jaz zf-met zf-C2H2_2 zf-C2H2_4 Zf-C2H2_ZNF451_2nd C2H2_ASCIZ_4th C2H2-zf_KIN17 zf-C2H2_STOP2_C
Other DBs
NCBI-GeneID: 120699555
NCBI-ProteinID: XP_039839496
LinkDB
Position
3K:52139622..52143303
AA seq 608 aa
MASAAAGGAPKRCYYEVLGLSRDCSPTDIKLAFRRLALSLHPDKQPPGADLAAATAAFQE
LQHAHSVLSDPQERAYYDSHRSQILFSDASAAGAKSASPVPDLFAFFSSSAFSGFSDTGR
GFYKVYGDVFDRVFAQELAYARRMGVPEPAAPPVIGNLDSPYAQVTAFYNYWLGFGSVMD
FGWAAEWDAARGENRRVRRLMEEDNKKAMRKARREYNDAVRGLAAFCKKRDKRVVDMALK
KKAEEEKRRAEEKERKKEEEKRKKERVMSYQEPDWARGDEEEGLYDEEEEEMKAKRKEEL
YCVACNKKFKSDKQWKNHEQSKKHRDKIAELRMAFKEEEESLKEAEEEGEGDWNEIDVGF
DFKPTQESDDESAFSDAVEELAEELEEGLEVRDKKNDDKVSDSAEQEVGSYDEASVLEAM
LSSRKNRKGGYVAPPEEALSGAAEDDDDDRSSEINNTKRKGRRRRAAKKEQDEGTYDDNE
QHGKSEAKAQESGHGNDVDDKMEGPSSSNDDSASASKEDNQNGKNSNPKKNKKNKKGAEK
KIVSTDQKSTSKADQKSTSKGKKQKEVSKAPSNDCETCGGTFESRNKLFSHLEETGHAML
KMRQKNRG
NT seq 1827 nt   +upstreamnt  +downstreamnt
atggcgtccgcggcggcgggcggcgcgccgaagcgctgctactacgaggtcctgggcctc
tcccgcgactgctcccctaccgacatcaagctcgccttccgccgcctcgcgctctccctc
caccccgacaagcagccccccggcgccgacctcgccgccgccaccgccgccttccaggag
ctccagcacgcgcactccgtcctctccgacccgcaggagcgcgcctactacgactcccac
cgctcccagatcctcttctccgacgcctccgccgccggcgccaagtccgcctccccggtc
ccggacctctttgccttcttctcctcctccgccttctccggcttctccgacaccggccgc
ggcttctacaaggtctacggcgacgtcttcgacagggtcttcgcgcaggagctcgcctac
gcgcgccggatgggggtccccgaacccgccgcgccgccggtcatcgggaacctcgattcc
ccctacgcgcaggtcaccgccttctacaattactggctgggcttcggctcggtcatggac
tttgggtgggcagccgagtgggacgccgcgcgcggggagaaccgccgcgtccgcaggctc
atggaggaggacaacaagaaggccatgcgcaaggcgcggcgggagtacaatgacgccgtc
aggggcctcgccgcgttctgcaagaagagggacaagagggtggtggacatggcgctgaag
aagaaagcagaggaggagaagaggagggctgaggagaaagagaggaagaaggaggaggag
aagaggaagaaggagcgtgtgatgtcgtatcaggagcctgattgggcgaggggggatgaa
gaggaaggcctgtacgacgaggaggaagaggagatgaaggccaagagaaaggaggagttg
tactgcgtggcgtgtaataagaagttcaaatcggataagcagtggaagaaccatgagcag
tcgaagaagcatagggataagatcgctgagctgagaatggcgtttaaggaagaggaggag
tctttgaaggaggcagaggaggaaggggaaggcgattggaatgaaattgatgtggggttt
gattttaagcctacccaggagtcggatgatgagagtgcattttcagatgccgtggaagag
ttggctgaagagttggaggaaggcttggaggtgcgtgataaaaagaatgatgataaggtt
tccgatagcgcagagcaggaggttggttcatatgatgaggccagtgtattggaggcaatg
ctgtcaagccgcaaaaacaggaagggtggttatgtggctcctccagaggaagctttgtca
ggtgctgctgaggatgatgacgatgatagaagttctgaaattaataacacaaaaaggaaa
ggacgtaggagacgggcagcaaagaaggaacaagatgaaggtacttatgacgataatgag
cagcatggtaaaagtgaggctaaggctcaggagtccggccatggtaatgatgtcgatgat
aagatggaagggccatcctcttctaacgacgacagtgcttcagcaagcaaggaagataat
cagaatggaaaaaacagcaatcctaaaaagaacaaaaagaacaagaaaggcgcagaaaag
aaaattgtttctactgatcagaagagcacatcaaaggctgaccagaagagcacatcaaag
gggaagaagcaaaaggaggtctcaaaagcacccagtaatgattgtgaaacctgtggagga
acttttgagtcaaggaacaagttgttctctcacttggaagaaacaggtcatgcgatgcta
aagatgcgccagaaaaatcgtggatga

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