Panicum virgatum (switchgrass): 120699555
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Entry
120699555 CDS
T07260
Name
(RefSeq) DNAJ protein JJJ1 homolog
KO
K09506
DnaJ homolog subfamily A member 5
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120699555
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120699555
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
120699555
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP40 / DNAJ
120699555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaJ
ZUO1-like_ZHD
zf-C2H2_jaz
zf-met
zf-C2H2_2
zf-C2H2_4
Zf-C2H2_ZNF451_2nd
C2H2_ASCIZ_4th
C2H2-zf_KIN17
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
120699555
NCBI-ProteinID:
XP_039839496
LinkDB
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Position
3K:52139622..52143303
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AA seq
608 aa
AA seq
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MASAAAGGAPKRCYYEVLGLSRDCSPTDIKLAFRRLALSLHPDKQPPGADLAAATAAFQE
LQHAHSVLSDPQERAYYDSHRSQILFSDASAAGAKSASPVPDLFAFFSSSAFSGFSDTGR
GFYKVYGDVFDRVFAQELAYARRMGVPEPAAPPVIGNLDSPYAQVTAFYNYWLGFGSVMD
FGWAAEWDAARGENRRVRRLMEEDNKKAMRKARREYNDAVRGLAAFCKKRDKRVVDMALK
KKAEEEKRRAEEKERKKEEEKRKKERVMSYQEPDWARGDEEEGLYDEEEEEMKAKRKEEL
YCVACNKKFKSDKQWKNHEQSKKHRDKIAELRMAFKEEEESLKEAEEEGEGDWNEIDVGF
DFKPTQESDDESAFSDAVEELAEELEEGLEVRDKKNDDKVSDSAEQEVGSYDEASVLEAM
LSSRKNRKGGYVAPPEEALSGAAEDDDDDRSSEINNTKRKGRRRRAAKKEQDEGTYDDNE
QHGKSEAKAQESGHGNDVDDKMEGPSSSNDDSASASKEDNQNGKNSNPKKNKKNKKGAEK
KIVSTDQKSTSKADQKSTSKGKKQKEVSKAPSNDCETCGGTFESRNKLFSHLEETGHAML
KMRQKNRG
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgcggcggcgggcggcgcgccgaagcgctgctactacgaggtcctgggcctc
tcccgcgactgctcccctaccgacatcaagctcgccttccgccgcctcgcgctctccctc
caccccgacaagcagccccccggcgccgacctcgccgccgccaccgccgccttccaggag
ctccagcacgcgcactccgtcctctccgacccgcaggagcgcgcctactacgactcccac
cgctcccagatcctcttctccgacgcctccgccgccggcgccaagtccgcctccccggtc
ccggacctctttgccttcttctcctcctccgccttctccggcttctccgacaccggccgc
ggcttctacaaggtctacggcgacgtcttcgacagggtcttcgcgcaggagctcgcctac
gcgcgccggatgggggtccccgaacccgccgcgccgccggtcatcgggaacctcgattcc
ccctacgcgcaggtcaccgccttctacaattactggctgggcttcggctcggtcatggac
tttgggtgggcagccgagtgggacgccgcgcgcggggagaaccgccgcgtccgcaggctc
atggaggaggacaacaagaaggccatgcgcaaggcgcggcgggagtacaatgacgccgtc
aggggcctcgccgcgttctgcaagaagagggacaagagggtggtggacatggcgctgaag
aagaaagcagaggaggagaagaggagggctgaggagaaagagaggaagaaggaggaggag
aagaggaagaaggagcgtgtgatgtcgtatcaggagcctgattgggcgaggggggatgaa
gaggaaggcctgtacgacgaggaggaagaggagatgaaggccaagagaaaggaggagttg
tactgcgtggcgtgtaataagaagttcaaatcggataagcagtggaagaaccatgagcag
tcgaagaagcatagggataagatcgctgagctgagaatggcgtttaaggaagaggaggag
tctttgaaggaggcagaggaggaaggggaaggcgattggaatgaaattgatgtggggttt
gattttaagcctacccaggagtcggatgatgagagtgcattttcagatgccgtggaagag
ttggctgaagagttggaggaaggcttggaggtgcgtgataaaaagaatgatgataaggtt
tccgatagcgcagagcaggaggttggttcatatgatgaggccagtgtattggaggcaatg
ctgtcaagccgcaaaaacaggaagggtggttatgtggctcctccagaggaagctttgtca
ggtgctgctgaggatgatgacgatgatagaagttctgaaattaataacacaaaaaggaaa
ggacgtaggagacgggcagcaaagaaggaacaagatgaaggtacttatgacgataatgag
cagcatggtaaaagtgaggctaaggctcaggagtccggccatggtaatgatgtcgatgat
aagatggaagggccatcctcttctaacgacgacagtgcttcagcaagcaaggaagataat
cagaatggaaaaaacagcaatcctaaaaagaacaaaaagaacaagaaaggcgcagaaaag
aaaattgtttctactgatcagaagagcacatcaaaggctgaccagaagagcacatcaaag
gggaagaagcaaaaggaggtctcaaaagcacccagtaatgattgtgaaacctgtggagga
acttttgagtcaaggaacaagttgttctctcacttggaagaaacaggtcatgcgatgcta
aagatgcgccagaaaaatcgtggatga
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