Panicum virgatum (switchgrass): 120699571
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Entry
120699571 CDS
T07260
Name
(RefSeq) eukaryotic translation initiation factor 5B-like
KO
K03243
translation initiation factor 5B
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pvir03012
]
120699571
Translation factors [BR:
pvir03012
]
Eukaryotic type
Initiation factors
eIF-5
120699571
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
MMR_HSR1
GTP_EFTU_D4
GTP_EFTU_D2
ATP_bind_1
Roc
Motif
Other DBs
NCBI-GeneID:
120699571
NCBI-ProteinID:
XP_039839511
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All DBs
Position
3K:52950685..52955762
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AA seq
838 aa
AA seq
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MIQEHLARAREEERRAEERRREEEARRAEEERRAREEAERRAEEERRAREERRRKRQEEA
RKRAEREEKRRMEDARRRLGIAVPDAASGEGRHRRPVYESRKSKSQPKHQSGTNLGETHV
IEKQLEDMQSNASLEDTDGVVVDVLELSKEQITQPLSEDSSGIDDNDAWENKSFGEFDAQ
LCGDSPPFGEEEDERTEEKHVYSATPIADSMSLSDDIGEDVVSILQDDGSSNGIDRELRA
PICCILGHVDAGKTKLLDCIRRSNVQGGEAEGITQQIGATYLPVENIRERSSLKAEATIK
VPGLLVIDTPGHQSFSNMRLRGSSLCDIAVVVVDITRGLEKQTIESLDLLKHRNVRFIVA
LNKVDRLYRWKTCPNAPIAKALKSQSEDVQSEFKWRVTEVVTQLKENGFNAALYYENKRM
KGVVNIVPTSAVSAEGIPDLLLLLVRWVPKIMMERLTYANNVECTVLEVNEDKDFGTTID
VVLINGALRKGDQIVVCTKQGPVTTNIRYLLTPYPMKELKAKGVYKHHEELKAAQGVKIA
VRGLRHAIAGTALIVVKPGDDLEQAEAAAVQEISNANSLFNEDERGEGNDGTAIEEISRI
KTCKEGVYVQASSLGTLEAIIEHLKTLSLDIPVGGCNLGPVHKQDVLKATAMLKRKEEYA
AILAFDVKVMPEAFDLAAESGVKIFMAHTVYKLVDSFTDHIKKLKEEKKKQYAAEAVFPC
TLKVLPNHVYHKKDPIVCDVEVLEGVVKVGTPICVSVPSKDRDADVVHSLGRISSMETSN
GKPIDSAKKGVVSIKIIGENPQERSRLYGRHFNADNVLLSQISRKSIDVLEPGRVLSG
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgatccaagagcacctggcgcgcgcgcgcgaggaggagcggcgcgcggaggagaggcgc
cgggaggaggaggcgaggcgcgccgaggaggagcgcagggccagggaggaggcggagagg
cgcgccgaggaggagaggagggcgcgggaggagaggcggcgcaagaggcaggaggaggcg
cggaagcgggccgagcgggaggagaagcgccggatggaggatgcgcgaaggcggctcggc
atcgccgtccctgatgccgccagcggtgagggtaggcacagaaggcccgtgtatgagtcg
agaaagtcaaaatcacagcccaagcatcaatctggaactaatttgggagaaactcatgta
attgagaagcaattggaggacatgcagagcaatgcttccctggaagatactgatggagta
gttgttgatgtgctggaattgagcaaggaacagattacccaaccattatcagaagatagc
agtggaatcgacgacaatgatgcttgggagaataagagctttggcgaatttgatgctcag
ttgtgtggtgattctcccccttttggagaagaggaagatgagcgaacagaggaaaaacat
gtgtactctgctactccgattgctgactcgatgagtttatctgatgatattggggaagat
gtggtctctatccttcaggatgatggttcaagcaatggcattgatagggagcttcgagca
ccaatatgttgtatccttgggcacgtggatgctggaaaaacaaagctgcttgattgcatc
cggcgaagcaatgttcagggtggagaggctgagggaatcacacagcagattggtgcaacc
tacttaccagttgagaatatcagggagaggtcctccctgaaagctgaggccacaatcaag
gttcctggtttgcttgtaattgacacccctggccaccagtcattcagtaacatgcgcttg
aggggatcaagtttgtgtgacattgctgtagtggttgttgatattacgcgtgggctggag
aagcagaccattgagtcccttgatcttttgaaacaccgcaacgtgaggtttattgttgcc
ttgaacaaggttgatcggctgtataggtggaagacttgtcccaatgcaccaatagcaaaa
gcgctcaagagccaatctgaagatgtccaaagcgaattcaaatggagggtaactgaggtt
gtaacacaacttaaggaaaatggcttcaacgccgccctgtattatgaaaacaagaggatg
aaaggagtggtgaatattgtcccaactagcgctgtaagtgctgaaggcattccagacctt
ctgctgctgctggtgcggtgggtgccaaaaataatgatggaaagactgacatatgccaat
aatgtagagtgtactgtgctggaggtcaatgaagacaaagatttcggaactactattgac
gtagtgctgattaatggtgcacttcgtaaaggtgatcaaatagttgtttgcaccaaacag
gggcctgtcacaaccaacataagatatttgttgacaccttatcccatgaaagaactgaaa
gctaagggagtatataagcatcacgaggagcttaaagctgcccaaggggtaaaaattgca
gtgcgaggactgcgacatgctatagcaggcactgctctcattgtggtgaaacctggggat
gatctggaacaagctgaagccgctgcagtgcaagaaatcagtaatgccaacagcctgttc
aatgaggatgaaaggggtgagggtaatgatggaacagcaatagaagaaataagtaggatc
aaaacttgcaaggagggtgtctatgtgcaagcatctagtcttggaaccttggaagccatt
attgagcatttgaagaccctttctttggacattcctgttggtggttgcaacttaggccca
gtgcacaagcaggatgtcctgaaagcgactgctatgctgaagaggaaagaagagtatgca
gccatcttggcctttgatgtcaaagtaatgcctgaggcttttgaccttgcagctgagtca
ggggtgaagatttttatggctcatacggtatacaagcttgttgacagctttactgatcac
attaagaaactgaaggaagagaagaagaagcaatatgcagctgaggcagtgttcccatgc
acccttaaggttctgccaaaccatgtctaccataaaaaagatccaattgtttgtgatgtt
gaagttttggaaggtgttgtcaaggtgggaaccccaatttgtgtctctgttccaagcaag
gatagagatgcagacgtggttcatagccttgggaggatatcttccatggaaacatccaat
ggaaagccgattgattctgccaagaaaggagtagtgtcgataaagataattggggagaac
cctcaggagaggtcccgattgtatggacgccattttaatgccgacaacgtgctgctcagc
caaatctctaggaaatctattgatgtgctggaacctggaagagtattatcaggatga
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