Panicum virgatum (switchgrass): 120699603
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Entry
120699603 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 33-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120699603
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120699603
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120699603
NCBI-ProteinID:
XP_039839537
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Position
3K:53506633..53509407
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AA seq
489 aa
AA seq
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MFQNVPAKMKRLVSKSWEESRLLWQVAFPAILTEVFQFSIGFVTTAFVGHLGEVELAAVT
VVENILEGFAFGVLFGMGSALDTLCGQAVGAGQLDMLGVYTQQSWLVCGAAAAALAPAYA
LVSPILRSLLRQPRDVSAAAGPYARWALPRLLAHAANYPLLKFFQTQSEVWPVAAISGAS
LAAHAALTYAAVRRLGLGLRGAAMSGNISHWLIVVAQFVYMARAGRFQDSWKGFSIRAFR
NLGAFVKLSLASAVMICLEVWYYAALLILVGLLKNAKLQLDIMSVCINYEFWTMMVALGF
STAISVRVSNELGANRPKVAQFSVVVAASTSAFVGATFMAVFLVWRTSLPKFFSDSEEVI
HGASRLGYLLAVTVFLSSIWPLLSGVAVGSGAQVLVAFVNVGSYYLVGIPLGVLFGFKLK
LGTLGIWMGMLTGTSLQIAILLFIIVRMKWERQSMLAIERITEWGAKNNDRELMASVHTN
DQMGLASSE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgttccaaaatgttccagccaaaatgaagaggcttgtgagcaagagctgggaggagtcg
aggctgctatggcaggtcgccttcccagcgatcctcaccgaggtgttccagttttccatc
ggcttcgtcaccaccgctttcgtcggccacctcggcgaagtcgagctcgccgccgtcacc
gtcgtggagaacatcctggagggctttgctttcggcgtcctgttcggcatggggagcgcg
ctggacacgctgtgcgggcaggccgtgggcgccgggcagctcgacatgctgggcgtctac
acccagcagtcgtggctcgtctgcggcgccgcggcggcggcgctcgcgccggcgtacgcc
ctggtctcgccgatcctgcgctccctcctccgccagccccgcgacgtgtccgccgccgcc
gggccgtacgcccggtgggcgctcccgcggctgctcgcccacgcggccaactacccgctg
ctcaagttcttccagacccagagcgaggtctggcccgtggccgccatctccggcgcgtcg
ctcgccgcccacgccgcgctcacctacgccgccgtgcgccggcttgggctcggcctgcgc
ggggccgccatgtccggcaacatctcccactggctcatcgtcgtcgcgcagttcgtgtac
atggcccgagcaggccggtttcaggattcgtggaagggcttctcgattcgcgcgttcagg
aacctcggcgccttcgtcaagctctcgctggcgtcggctgtcatgatctgcttggaggtt
tggtattacgcggcactgctcattctcgtgggtctcctgaagaatgccaagctccagctt
gacatcatgtcagtttgcatcaactacgagttctggaccatgatggtggcactgggtttc
agcacagcaatcagcgtgagggtgtcgaatgagctgggcgcaaacaggcccaaggtagca
caattctcggtcgttgttgcagcatcaacatcggccttcgtcggagcaactttcatggcc
gtcttcctcgtttggaggactagcttgcccaagttcttcagcgacagcgaagaggtgatt
catggagcctccagattagggtatcttctcgctgtgactgtctttttaagcagcatctgg
cctctactatcaggtgtggcggtagggtcaggggcgcaagtgcttgttgcgttcgtaaac
gttggcagctactacttggtgggaattccattgggggtcctgtttggcttcaagctaaaa
ctcggtacactggggatatggatgggcatgttgacagggacttcactccaaatagccata
cttcttttcattatcgtcagaatgaagtgggagagacagtcgatgcttgctattgaaagg
attacagagtggggagcaaagaacaatgaccgggaactgatggcatctgtacatacaaat
gatcagatgggtcttgcaagtagtgaataa
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