KEGG   Panicum virgatum (switchgrass): 120699652
Entry
120699652         CDS       T07260                                 
Name
(RefSeq) syntaxin-132-like
  KO
K08486  syntaxin 1B/2/3
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    120699652
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120699652
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pvir04147]
    120699652
Membrane trafficking [BR:pvir04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    120699652
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   120699652
  Exosomal proteins of other body fluids (saliva and urine)
   120699652
SSDB
Motif
Pfam: Syntaxin SNARE APC_N_CC T2SSF Fusion_gly Baculo_p24 DUF6688 DUF745 RmuC SMIM5_18_22 RSS_P20 Synaptobrevin
Other DBs
NCBI-GeneID: 120699652
NCBI-ProteinID: XP_039839603
LinkDB
Position
3K:54203942..54207351
AA seq 307 aa
MHNLLTDSFELGKREQVPGNVDIELGLQGDLTSSAQPGFEGFFEQVKDIENLLNTLTKLL
KDLQNSNEESKVVTKASAMKEVKKRMDKDINEVTKVARLAKSKVEQLNKDNAANRQKPGF
GKGSGVDRSRTTTTIALTKRLRERILEFQTLREEIQKEYRDVVERRVFTVTGERADEETI
DKLIETGNGEQIFQRAIQEQGRGRVLDTLQEIQERHDAVKEIEKKLHDLHQIFLDLGVLV
EAQGEMLDNIETQVTGAAEHIETGTNLLQKAKKLQKNTRKWTCIAIIILLIIVLIVILSL
KPWSWGK
NT seq 924 nt   +upstreamnt  +downstreamnt
atgcataacctactcacggactcgtttgagctcggcaagagggagcaggtccctggaaat
gtcgacatcgagctcgggttgcagggtgacttgacaagttctgcgcagcctggtttcgaa
ggcttctttgaacaggtcaaggatatcgaaaacctgctcaataccttgacaaagctactg
aaggaccttcagaactcaaatgaggagtccaaagttgtcacaaaggcatctgcgatgaaa
gaggttaaaaagcgcatggataaggatatcaatgaggtgacgaaggttgctcgtctggca
aaatcaaaagtagagcaactgaacaaagataatgctgcaaacagacaaaagccaggattt
ggcaagggatcaggtgtggatcgatcccggacaacaaccaccattgctttgacaaagagg
ttgagagaacgtatattggagtttcagacattaagagaagaaattcagaaggaataccgc
gatgtagtggagcgccgtgttttcactgttactggcgagcgtgctgacgaagagactatc
gataagctgatagaaacaggcaacggcgagcagatctttcagagagcaattcaggagcaa
gggcgaggaagggtgctggacacactgcaggagatccaggagcgacacgatgcagtgaaa
gagattgagaagaagcttcatgatctgcatcagattttcctcgacttgggtgtcttggtc
gaagctcaaggagagatgctggacaacattgagacacaggtcacaggtgcagctgagcat
attgagaccggaacaaaccttctccagaaagcgaagaagctgcagaagaacacacgaaaa
tggacctgcatagcgataatcatcctcctgataatcgtacttatcgtcatcctctcccta
aaaccgtggtcatgggggaagtag

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