Panicum virgatum (switchgrass): 120699658
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Entry
120699658 CDS
T07260
Name
(RefSeq) bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like isoform X1
KO
K13832
3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:
4.2.1.10
1.1.1.25
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00400
Phenylalanine, tyrosine and tryptophan biosynthesis
pvir00999
Biosynthesis of various plant secondary metabolites
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01230
Biosynthesis of amino acids
Module
pvir_M00022
Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
120699658
09110 Biosynthesis of other secondary metabolites
00999 Biosynthesis of various plant secondary metabolites
120699658
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.25 shikimate dehydrogenase (NADP+)
120699658
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.10 3-dehydroquinate dehydratase
120699658
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Motif
Pfam:
DHquinase_I
Shikimate_dh_N
Shikimate_DH
SDH_C
Sacchrp_dh_NADP
F420_oxidored
FAD_binding_2
AlaDh_PNT_C
Pyr_redox_2
NAD_binding_2
adh_short
AdoHcyase_NAD
AAA_30
DAO
2-Hacid_dh_C
GIDA
Motif
Other DBs
NCBI-GeneID:
120699658
NCBI-ProteinID:
XP_039839608
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Position
3K:complement(54280976..54286466)
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AA seq
542 aa
AA seq
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MATAMSVSSASPAAAAAVARPRTLVCVPATARAPREMAAELAAAAALGADLAELRLDRLA
GFAPRRDLPVILAEPRPLPALVTYRPKWEGGEYEGDEEPRFEALMLAMELGAEYVDMELK
AANKFMRLLAGKKPENCKLIVSSHNYENTPSVEELADLVAQIQATGADIVKIATTATEIV
DVARMFQILVHCQEKQVPIIGLVMNERGFISRVLCPKYGAFLTFGSLEKGKESSPAQPTA
ADLINLYNIRQIGPDTKVFGIIGKPVGHSKSPILHNEAFRSVGFNAVYVPFLVDDLAKFL
NTYSTPDFAGFSCTIPHKEAAVRCCDEVDPIARDIGAVNTMVRRPDGKLVGYNTDYVGAI
SAIEDGIRACQLTDPTTSPLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQE
LANLIGGPALTLADLENYHPEEGMILANTTAIGMHPNVNETPLSKQALKSYAVVFDAIYT
PKETRLLREAAECGATVVSGLEMFIRQAMGQFEHFTGMPVDNKNFRAITSSLDNPNTMKP
RL
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggccacggcgatgtcggtgtcgtcggcgtccccggccgccgccgccgccgtcgcgcgc
ccgcggacgctcgtctgcgtgccggccacggcgcgggcgccccgcgagatggcggccgag
ctggccgccgccgccgcgctcggcgccgacctcgcggagctccgcctcgaccgcctcgcc
ggcttcgcgccgcgcagggacctccccgtcatcctcgccgagccacgcccgctccccgcg
ctcgtcacctacaggcccaagtgggaaggtggcgagtacgaaggcgacgaggagccgcgg
ttcgaggcgctgatgctggcaatggagctgggagctgaatacgttgatatggagctcaag
gctgccaacaaatttatgagacttttggctgggaagaaacctgaaaactgtaagctcatc
gtttcatcccataactatgagaatactccatcggtagaggagcttgcagatttggtggct
cagatacaagcaacaggggctgatattgtgaaaattgcaaccactgccactgaaattgtt
gatgtggcaagaatgtttcaaatacttgtacattgccaagaaaagcaggtgccaatcatt
gggctggtaatgaatgagagaggttttatttcccgagttctttgcccaaaatatggtgca
ttccttacttttgggtctctcgaaaaaggaaaagaatcctcacctgcacaaccaacagca
gcagacttgattaacttgtacaatatcaggcaaataggcccagacactaaggtctttggt
attattgggaagccagttggtcacagtaagagcccaattttgcataacgaagctttcaga
tctgtgggtttcaatgctgtgtatgtgccctttttggtggatgacctggctaaatttctt
aatacatactctacaccagactttgctggcttcagttgcacaattccccataaggaagct
gcagttaggtgctgtgacgaagttgatcctattgccagggacattggagcggttaacaca
atggtgagaagacctgatggaaaacttgttggctataatactgactatgtcggtgctatt
tctgctattgaggatggaataagagcatgtcaactaacagatccaaccacttccccactt
gctggaagacttttcgttgttattggggctggtggtgcgggcaaagccctagcatatggt
gcaaaagagaagggagcaagagttgtaattgcaaaccgtacttttgcacgtgctcaagaa
cttgccaacttaattggcggacctgcattgactctggcggatctggaaaattaccatccg
gaggaagggatgattcttgcaaatacaacagccatcggaatgcatccaaatgtcaatgaa
actcctttatctaagcaagcactgaaatcctatgccgttgtctttgatgctatctacacg
ccaaaagagaccagacttctccgtgaagctgcagaatgtggagccacagttgttagcggt
ctggaaatgtttataagacaagcaatgggtcaatttgagcatttcacgggcatgccagtt
gacaacaaaaacttcagagcaattacaagttcgctggacaaccctaacaccatgaagcct
cgtctgtga
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