Panicum virgatum (switchgrass): 120699830
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Entry
120699830 CDS
T07260
Name
(RefSeq) diaminopimelate epimerase, chloroplastic-like isoform X1
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00300
Lysine biosynthesis
pvir00470
D-Amino acid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01230
Biosynthesis of amino acids
Module
pvir_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
120699830
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
120699830
Enzymes [BR:
pvir01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
120699830
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-GeneID:
120699830
NCBI-ProteinID:
XP_039839849
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Position
3K:57064196..57071415
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AA seq
352 aa
AA seq
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MSPAATTLFAAAATVAAPTAPFRACVRLPLRGGPGAPRRAVTSMAVSTPRSAAAASFLER
RESERALHFVKYQGLGNDFIMVDNRDSSVPKVTPEEAAKLCDRNFGIGADGVIFVMPGSN
GADYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGTHSFTIHTGAGLIIPEIQSDGQ
VKVDMGEPILSGPDIPTKLQATKNKAVVQAELDVEGRPWHVTCVSMGNPHCVTFGAKDLE
QVLQVDNLKLSEIGPKFEHHEMFPARTNTEYVQVLSHSHLKMRVWERGAGATLACGTGAC
AVVVAAVLEGRAERKCVVDLPGGPLKIEWREDDNHVYMTGPAEAVFYGSVAH
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccgccgccaccaccttgttcgccgccgcagccaccgtcgcggcgcccaccgcc
ccgttccgcgcctgcgtccgacttccgctccgcgggggccccggtgcccctcgccgcgcc
gtcacctcgatggccgtttccaccccgaggtccgccgccgccgcctcgttcctcgagcgc
cgcgagtccgagcgcgccctccacttcgtcaagtaccagggcctggggaacgacttcatc
atggtggacaatcgggattcgtctgtgccgaaggtgactcctgaggaagcggcaaagctg
tgcgaccggaacttcggcattggcgccgacggcgtcatcttcgtcatgccggggtccaat
ggcgcggactacactatgaggatcttcaactccgacggaagtgagccggagatgtgtggt
aatggagtccgttgctttgctcggtttatagctgagcttgagaacctgcagggaactcat
agcttcacgattcatactggtgctggactgatcattcctgaaatacaaagtgatggtcag
gtaaaggttgatatgggcgagcccatcctttctggaccagacatccccacaaaactgcaa
gctaccaagaacaaagctgttgtccaagctgaattggatgttgagggcagaccatggcat
gtaacatgtgttagcatgggcaaccctcactgtgtcacatttggtgcaaaggacttagag
caggtcttgcaggttgataatctaaaacttagtgaaattgggcctaaatttgagcatcat
gaaatgtttcctgctcgaaccaacacagaatatgtacaggttttgtctcactcacacctc
aaaatgcgagtttgggagcgcggtgctggagcaactctcgcttgtggtactggtgcttgt
gcagttgttgttgctgctgttcttgagggccgagctgagcggaaatgcgtagttgatttg
cctggcggaccattgaaaatagagtggagggaggatgacaatcatgtttacatgactggt
ccagcagaggctgtcttttatggatctgttgctcactag
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