Panicum virgatum (switchgrass): 120699954
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Entry
120699954 CDS
T07260
Name
(RefSeq) cytoplasmic tRNA 2-thiolation protein 2-like
KO
K14169
cytoplasmic tRNA 2-thiolation protein 2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
120699954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120699954
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
120699954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTU2
DUF3375
DUF3557
Motif
Other DBs
NCBI-GeneID:
120699954
NCBI-ProteinID:
XP_039840000
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All DBs
Position
3K:complement(59475661..59478551)
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AA seq
463 aa
AA seq
DB search
MAAAASACGGAGCGPHCSSPSAAGAEEGDPAERMGRLSIAAGAAATCGKCDGGGPAVAVS
GGAGMCRECFRAYLFGKFKLAVTSNAMVCPTDAVLLAFSGGPASRVSLQFIHEMQSKAIQ
SWETSNSQALPAFGIGVAFVDESALSVRPEHKTETAAEDIESIVSSLSPGNKQVHFAPLE
DVFSSASEDKAARLKEVLSMIDDETGRDDFVCCLRMLSLQKIALENGYTKIMLGTCASGR
ACHVLSATVKGQGYSLPADVQYVDTRWEVPVVLPLHDCLAQELSLLCELDSLKTQQLLDR
PCSGINSLVASFVSRLREENPSREHTILRTAQKLKPFSFNKFSANGYHDFLPSRLRPKFQ
NVDTNESNFSEILCLICGSPFSESEFQNLENTKHKAQKKIDLYTAHCCQSCNFQILPAAT
DAYEHFFSLLPKSWTEKVDAASVSNSSLRDQIKDYLLEEDDVN
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgcctccgcctgcggcggcgcgggctgcggcccgcactgctcctccccc
tccgccgcaggcgccgaggagggcgatccggcggagaggatgggccggctttcgatcgcc
gccggcgccgccgccacgtgcggcaagtgcgacggcggcggcccggccgtcgcggtgtcc
ggaggcgctggtatgtgtcgggaatgcttccgggcctacctgttcgggaagttcaagctc
gccgtcactagtaatgccatggtgtgccccaccgacgccgtcctcctcgccttctccggc
ggccccgcctccagggtgtctctgcaattcatacacgagatgcagtccaaggcaatccag
agctgggagacgagcaactcgcaggccctgccggccttcggcattggtgttgcatttgtc
gacgagagtgccctttcggtgaggccggaacacaaaactgagacggcggctgaagatatc
gagtcgatcgtgtccagtttgtccccaggcaataagcaagtgcattttgcccctcttgag
gatgtgttctcatccgcatcagaggacaaggcagccaggctgaaggaggtgctcagcatg
atcgatgatgagacagggagggatgactttgtttgctgcttgcgcatgctgtcactgcag
aagattgcactggaaaatggctacaccaagatcatgctagggacatgcgcttctggaaga
gcatgccatgtgctatctgccaccgtgaaggggcaaggctactctttaccagctgatgtc
caatatgtcgatacacggtgggaagtacctgtggttcttccactccatgattgcctagcc
caagagcttagcttgctctgtgaacttgatagtttaaagacgcagcaacttcttgatagg
ccttgcagtggcatcaacagcttagttgcctcctttgtttcacggctaagggaagagaat
ccttctcgagagcataccattttaagaactgcacaaaagcttaagccattctcttttaac
aagttctcagcaaacggctatcatgatttcctgccatcacggcttcgtcccaagtttcag
aatgttgataccaacgagtctaatttctcagagattctctgcctgatatgcggaagcccg
ttcagtgaatcagaattccagaatttggaaaacacgaagcacaaggcccagaagaaaatt
gatctttatactgctcattgctgtcaaagctgcaatttccagattctaccagctgctaca
gatgcatacgaacatttcttttcactactaccgaagtcttggactgagaaagttgacgct
gcatctgtcagtaatagctcactaagagatcagataaaggactacctactggaagaagat
gatgtaaactga
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