Panicum virgatum (switchgrass): 120699972
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Entry
120699972 CDS
T07260
Name
(RefSeq) AUGMIN subunit 6-like isoform X1
KO
K16589
HAUS augmin-like complex subunit 6
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120699972
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Augmin complex
120699972
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HAUS6_N
DASH_Dad2
DUF6612
Motif
Other DBs
NCBI-GeneID:
120699972
NCBI-ProteinID:
XP_039840030
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Position
1K:complement(24019537..24027347)
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AA seq
712 aa
AA seq
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MATDREKEREAELESAMYTNCLLLGLDPAVLGSPSSPVARVGLFRHSNPRLGEQLLYFLL
SSLRGPAQSAKDFDKVWPIFDSAQSREFRKIVQGIISELEQQGALPRSNSRVSSLATCCG
PRFVELLWQLSVHALREVHRRTFAADVASNPLPAALTDVSYLHAAALLPVTKARIALERR
KFLKNANIAVQRQTTWSNLAHEMTAEFRSLCAEEAYLQQELEKLQDMRNKAKLEGDLWDE
RISSSSGQNSHLVSKATRLWESILARKGQHEVLASGPIEDLIAHREHRYRISGSQLLAAM
DMSPSVPHSELLSARAGEISPILDKQEQISPLFQGKEEALSRPDDRNGRGQQTVDVAEIL
RRWTHALQRIHKQSLHLAKANDGEGPELLRSASDGETSTHADSLTATLAEHRQHLVSIQG
LINQLKEAIPAMQHSIEELSEEVNSISNPMDLLNSRLPLSAGLGRSEQESSSEVSEMTSK
FSSTHLDRPGGSPALKLPPLFGLTPSSGKGTQAQKQNALIRQPSQEVTSEEKALTVPSNK
DQVNGSEHENDGYIAHYIRRSVREAALSKPLTNTERPQDKNSDNGSEHFFIPLSAGAARK
EMDAATNRRKQRPGLSSLQMKFPKSTSDLYYNADSPTNTSSVLLSEMNGHDPISAMSFLD
PVSGLAHQSFITDDALDQVFSPPLLMESTLFHDADEDLLAPLSEMDTALMEH
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggatcgggagaaggagcgcgaggcggagctagagagcgccatgtacaccaac
tgcctcctcctcggcctcgatcccgccgtcctcggctccccctcctcccccgtcgctcgc
gtcggcctcttccgccactcgaacccgcgcctcggcgagcagctcctctacttcctcctc
tcctcgctccgcggcccagcgcagtccgctaaggacttcgacaaggtctggccaatcttc
gactctgctcagtccagggagttcaggaagatcgtgcaagggataattagcgagctggag
cagcagggggcgctgccgaggagcaattccagggtctcgtcacttgctacttgctgcggc
cccagatttgttgagcttttgtggcaactctctgtacatgccttgagagaagttcacagg
agaacttttgcagctgatgttgcatcaaatccacttcctgcagcactaacagatgtttct
tatcttcatgctgctgctttactccctgtgaccaaggcaaggatagctctggagaggcgt
aaatttctgaaaaatgcaaacatagctgtccagaggcaaacaacatggtcaaatttggcc
catgaaatgaccgctgagttccgaagtctatgtgctgaagaggcttatttgcagcaagag
ttagagaaactacaagatatgagaaacaaagcaaaacttgaaggtgacctgtgggatgaa
cggatctcaagctcatctgggcagaattctcatttggtttctaaggcaactcgtctttgg
gaatcgatattggctcgcaaaggccaacatgaggttttagcttctggaccaattgaagat
cttatagcacatagggagcacagataccggatatctggatctcagttactagcagccatg
gatatgagtccaagtgttccgcattctgagttattatcagctcgagctggtgaaatttct
cctattttggacaagcaagaacagatttctccgctattccaagggaaggaagaagccctt
tcaaggccagatgataggaacggacgtggtcaacaaactgttgatgtagctgaaattctc
cgccgttggactcatgctttacagcgtattcataaacagtctcttcatttggccaaagca
aatgatggagaggggccagaattactgaggagtgcatctgatggagagaccagtactcat
gctgactcgttaactgcaacgttagctgaacatcgccagcatttagtcagtatacagggt
ctaattaatcaactaaaggaagctattccagcaatgcagcattcaatagaagaactctca
gaagaagtgaacagtatcagtaacccaatggatcttttgaattccagactaccgctttct
gccggccttggaagatcagaacaggaaagcagcagtgaagtttcagagatgacctctaag
ttctcttctacacacctggacaggcctgggggcagtcctgctctaaagctacctccatta
tttggcctaactccaagttctggaaaaggaacacaggcgcaaaaacagaatgctctaata
cgccaaccaagccaggaggtcacatcggaagagaaagcacttaccgtcccctcaaataaa
gatcaagtgaatggctcagagcatgaaaatgatggctatattgctcattacattagacgg
tctgttcgtgaagctgctctgtcaaagccattgacgaatacagagaggccacaagataaa
aatagtgacaatggttcagagcacttcttcattccgctgtcagcaggtgctgcaaggaag
gagatggatgcagcaacaaatcgacggaaacaaagaccaggtttatcgtcacttcagatg
aagttcccaaagagcactagtgacctttactacaatgcagacagcccaacaaacacaagt
tcagttctgttaagtgaaatgaatggacatgatcctatcagcgccatgagctttcttgac
ccggtcagtggtctggcacatcagtcatttatcactgatgatgctcttgatcaagtattc
tcccctcctctgttgatggaatctacgttgttccatgatgcagatgaggacctgctcgca
ccactgtcagagatggatacagcattaatggaacattag
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