Panicum virgatum (switchgrass): 120699978
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Entry
120699978 CDS
T07260
Name
(RefSeq) protein JINGUBANG-like
Organism
pvir
Panicum virgatum (switchgrass)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
PQQ_3
AFOR_N
WD40_2
SSL_N
Nup160
Motif
Other DBs
NCBI-GeneID:
120699978
NCBI-ProteinID:
XP_039840034
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Position
3K:59740467..59742499
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AA seq
484 aa
AA seq
DB search
MGNHNKLLQFLRPDPAAAAKQQSSSSSDDDDDGYASSSAPTTPTTGAATPSTANTSAAAS
PFAMSPWTQLPGLGFGAGAAGYGAGANTTGLLGSLVKADGHVYSLAAAGDLLYTGTDSRT
VRVWRGGRDLGGLRSGSGLVKAVVVAADGRVYTGHQDGKVRVWRASASAGDDPAAPHRRV
GSLPSLRDVLASALRPSRYVQTRRRRSGLWMRHFDAVSALCLDAAAGLIYSASWDRTFKV
WRAADSRCLESVHAHADAVNAVAAAGFDALVLTGSADGTVKVWRRGARGRRGRDTWHTME
RVLREGDSAVTAIAVAAEARVVYVASSDGAVAHWQWRRGAPPGAAPRNGGALRGHKMAVL
CLAVAGRVLVCGSADRTISVWRREEGADHARLAVLTGHTGPVKCVAMDEEEEEDDAGGAR
RWVLYSGSLDGSVKVWRVSSGSGGGAPGDALTPAARAWKGASPLPLRSWTPYAAAPEPKH
MGAA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggggaaccacaacaagctgctccagttcctgcgtccggacccggcggcggcggctaag
cagcagtcgtcgtcgtcgtccgacgacgacgacgacggctacgcgagctcctccgcgccg
accaccccgaccaccggcgccgccacgccgtcgaccgccaacacctccgcggcggcctcg
cccttcgccatgtccccctggacgcagctcccggggctcggcttcggcgccggcgccgcc
gggtacggcgccggcgcgaacacgacggggctcctcggctcgctcgtcaaggcggacggc
cacgtctactcgctcgcggcggcgggggacctgctgtacacgggcacggactcgcgcacg
gtccgggtgtggcggggcggccgcgacctcggcgggctccgctccggcagcggcctcgtc
aaggccgtcgtggtggccgccgacggccgcgtctacacgggccaccaggacggcaaggtc
cgcgtgtggcgcgcctccgcctccgccggcgacgaccccgccgcgccgcaccgccgggtg
ggctcgctcccgtccctccgcgacgtgctcgccagcgccctccgcccgtcgcgctacgtg
cagacgcgccgccgccgcagcggcctctggatgcgccacttcgacgccgtctccgcgctc
tgcctcgacgccgcggcggggctcatctactcggcctcctgggaccgcaccttcaaggtg
tggcgcgccgccgactcccggtgcctcgagtccgtgcacgcccacgccgacgccgtcaac
gcggtggccgccgcggggtttgacgcgctcgtgctcacgggctccgccgacggcaccgtc
aaggtctggcggcgcggcgcgcgaggccggcggggccgcgacacgtggcacaccatggag
cgggtgctgcgggagggggacagcgcggtgacggccatcgccgtcgccgccgaggcccgg
gtcgtgtacgtggcctcctccgacggcgccgtcgcgcactggcagtggcgccgcggggcg
ccgcccggcgccgcgccccggaacggcggcgcgctgcggggccacaagatggccgtgctg
tgcctcgccgtggccgggcgcgtcctcgtctgcggctccgcggaccggaccatctccgtg
tggcgacgcgaggagggcgccgaccacgcgcgcctcgccgtgctcacgggccacacgggc
cccgtcaagtgcgtcgccatggacgaggaggaggaggaggacgacgccggcggcgcgcgc
cggtgggtgctgtacagcggcagcctcgacgggtccgtcaaggtgtggcgcgtgtcgtcg
ggatccgggggcggcgcgcccggggatgcgctgacgccggccgcgcgcgcgtggaagggc
gcctcgccgttgccgctgcggtcgtggacgccgtacgcggcggcgccggagcccaagcac
atgggcgcggcgtga
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