Panicum virgatum (switchgrass): 120700005
Help
Entry
120700005 CDS
T07260
Name
(RefSeq) gamma-tubulin complex component 5-like isoform X1
KO
K16572
gamma-tubulin complex component 5
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120700005
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120700005
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
120700005
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
120700005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCP_C_terminal
GCP_N_terminal
Motif
Other DBs
NCBI-GeneID:
120700005
NCBI-ProteinID:
XP_039840070
LinkDB
All DBs
Position
3K:complement(59974995..59981730)
Genome browser
AA seq
1031 aa
AA seq
DB search
MVLPKRATELVDGDDAQSFVQKLQLSVSKGLPHAVPVPALRTEEHELVKAVFQVIQGFET
SLLYWDSNVPGYREKAGIYVMHLSLTGLRSVLSPLLFASTCLKEVELFVRKVRMRPHRIP
TLDAFASSIDSWLTRLREAALKEEEQLFISVNRTITLLGLTDSMSSLCSGAEHLSQVVHG
VVPDGFWDSGALMASSEVSVHILNHLFKKLNEVCLVEDGKGEPHHMLLVIFAGSLLPYLQ
CLDSWLYDGILDDPYEEMFFFANSEVTIDQPAFWEMSYMLRIRDSRADGSTNSTDNESIR
KKESSSKESTTVGAYLKMNDQGCVDILCPIFLKDIARAIVSAGKSFQVIQHVQDAHRILT
RKDTYASNLYQSINCSSQQKIWPDTSSLRIQDGHPRSEDALEESTCQFGNDSREMGLLTL
SEIFLICLSGLLENGDHVYEYLRRLHADSVPNNKAFVERESNVQETKDICAESSTEKTWV
KLLKNATSGRKYHGIEKTISRNTAMDKPIFVPGDPQDASSNAVEAGHFTLSCYENPAITA
CREVLLRNPNSWSELNISESFHLPPLNDGNMRRAIFADGHSVGTSTIGDTQPTTSFPRLD
GTDYKFGFQFSDLDYVRQEDDRRTLEVLYAFPTLLPCANENVPLSEILPMQKDSTLASRV
LKFIQNMSLKDPLQPVCIIQECLSQCIKRQVDHIGKQILSKLMGEWRLMDELFVLRAIYL
LGSGDMLQQFLITIFDKLDRGSSWDDDFELNNLLQESIRNSADKMLLTAPDSLIVSLATN
NSDEGASASKKGRALGFGIDALDMLNFTYKVSWPLDLIVNTDALKKYNQVMGFLLKVKRA
KFVLDETRKWMWKARGRTAHNFKQHLIVAQKLLHFVDAFHQYVMDRVYHSAWTELCDGMA
SATTLDEVMEVHEAYLSSIQRQCFVASDKLWALIASRVKTILGLALDFHNVEQTLSTGGT
APAVRTRCEMEMDRIEKQFDECVVFLLRILSFKLNVGHFPHLADLVTRINYNHYFMSDNG
SFSAIPGSRQR
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggttctccccaaacgggccacagaattggtggatggcgatgatgcccaaagcttcgta
cagaagcttcagcttagtgtctccaagggccttcctcatgcggtgccggtgccagcactg
agaacagaagagcatgagctggttaaggctgttttccaggtgatccaaggttttgagaca
tccttgctctattgggacagtaatgtgcctgggtaccgtgagaaagcagggatatatgtg
atgcacctgtcactgacgggtctcaggtccgtgctgagtccacttctgtttgcgtcgaca
tgcttgaaggaagtggagctctttgttcggaaggttaggatgcgccctcacaggatcccg
acattggatgcatttgctagctcaattgattcttggcttacgaggctccgtgaagcagct
ttgaaggaggaagagcagctatttatttcggtcaacaggactataacgctactgggatta
accgattctatgtcaagtttatgttctggagcagaacatttgtctcaagtcgtgcatgga
gttgtgccagatggcttttgggattctggcgcactcatggcatctagtgaagtttcagtt
catattctcaaccatctcttcaagaagttaaatgaagtctgtcttgtggaagatggcaag
ggagagccacatcatatgctgcttgtgatattcgctggaagcttgctaccttatcttcag
tgtcttgactcctggctttatgatggtatccttgatgacccttatgaagagatgttcttt
tttgcaaatagtgaagttaccatagatcagccagcattctgggaaatgagctatatgctc
agaataagagattcaagagctgacggttcaacaaattcaactgataatgaatctatcagg
aaaaaagaatcaagcagcaaggaatcaactactgtaggcgcttacttgaaaatgaacgac
caaggttgtgtggatatattatgccccatattcttgaaagatattgcaagggctattgta
tctgctggaaaatcctttcaagttattcaacatgttcaagatgcgcatcgaattctaacc
cgtaaagatacatatgcttccaatctttatcagagtattaattgcagtagtcaacaaaaa
atctggccagatacctcaagtttaagaatccaagatggtcatccaagaagtgaagatgct
cttgaagaatccacatgtcagttcggaaatgattctcgtgaaatggggctcttaaccttg
tctgagattttcttgatatgcctatctggtctcttagaaaacggtgaccatgtttatgaa
tacttaagaagactgcatgctgatagtgttccaaataacaaagcttttgtggaaagggag
agcaacgtccaagaaacaaaggatatatgtgcagagagcagcactgagaagacttgggta
aagctccttaaaaatgctacgtcaggaagaaaatatcatggtattgagaagaccatatcc
agaaacactgctatggataagccaatatttgtccctggtgacccacaagatgcatcctcc
aatgcagtagaagcagggcacttcactttatcttgttatgaaaatccagccatcactgct
tgcagagaagtgctactgaggaatccaaattcttggagtgaactgaatatatctgaaagt
tttcatctccctcctctgaatgatgggaatatgcgaagagctatctttgctgatggacat
tctgtaggaactagcaccattggtgatacacagcctacaacctctttccccagactagat
ggcactgattataagttcggtttccaattcagtgatttggactatgtccgacaagaagat
gacagaaggaccttggaggtgctttatgcatttccaactcttcttccttgtgcaaatgaa
aatgtcccactgtcggagatcttaccaatgcagaaagatagtacactagcgtcaagagtt
ctgaagtttattcagaatatgagtttgaaagatcctcttcagccagtgtgtatcatccaa
gaatgcctttcccaatgcataaagagacaggtggatcacattggcaagcaaatcctgtcc
aagctaatgggtgaatggagattaatggatgaactgtttgtgttacgtgctatttatttg
ctaggatcaggtgacatgctgcagcagtttctgataacaattttcgataagctagataga
gggagttcctgggatgatgattttgagttgaataatttgttgcaggaatccataagaaac
tcagcggacaaaatgctcctgacagcaccggattctttgattgtttccttggcaacaaac
aacagtgacgaaggtgcatcagcttccaaaaaaggccgtgcacttggttttggcatcgac
gctcttgacatgcttaattttacatataaggtgtcttggcctctggatttaattgttaat
acagacgcactgaagaagtataatcaggttatgggattcttactgaaggtcaagcgggca
aagtttgttttggatgaaacgcgaaagtggatgtggaaggccagaggcaggactgcacat
aatttcaagcagcacttaattgtagcacagaagctcctccattttgtcgatgcgtttcat
cagtacgtcatggaccgagtatatcatagtgcatggactgaactttgtgatggcatggca
tctgctacgacattggatgaagtcatggaagttcatgaggcatatctctcttctattcag
cggcaatgctttgttgcctctgataagttgtgggccctcattgccagtcgagttaagact
attcttggattggctctcgactttcacaatgtagaacagactctcagtactggtgggact
gctccagctgtgaggacacgatgtgagatggaaatggatcggattgagaagcaatttgat
gagtgtgtcgtatttctcctgaggatcctatctttcaagctaaatgtgggtcattttccc
catcttgcggatctagttacaagaatcaattacaatcactatttcatgtccgataatggg
agcttctccgccattcctgggtctcggcaacggtag
DBGET
integrated database retrieval system
