Panicum virgatum (switchgrass): 120700128
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Entry
120700128 CDS
T07260
Name
(RefSeq) hydroxyproline O-galactosyltransferase GALT2-like
KO
K20843
hydroxyproline O-galactosyltransferase 2/3/4/5/6 [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120700128
Glycosyltransferases [BR:
pvir01003
]
O-Glycan biosynthesis
O-linked Gal type
120700128
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Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Gal-bind_lectin
Fringe
Motif
Other DBs
NCBI-GeneID:
120700128
NCBI-ProteinID:
XP_039840253
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Position
3K:61940154..61943474
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AA seq
652 aa
AA seq
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MKRARSSEVFLGAGRLRARRRLAPLLAAAAFAYLLFVSVKLAGFGSAGPAAAVSRLPAAG
AGKPLRRRVEQPAPRARAAAAVSGYGRITGEILRRREAGEGRRRRWGQLGNFTELERTAA
EAWALGARAWEEASAFTGDVDSRGAGEDPAECPGSLALGGGEAAAAAFLPCGLAAGSAVT
VVGTARAARPEYVEALERSSAGNGTVMVAQFAVELRGLRAADGEEPPRILHLNPRLRGDW
SGRPVLEMNTCFRMQWGRAQRCDGTPSRDDDQVDGFRKCEKWQRQDIVESKETKTSSWFN
RFIGRAKKPEMTWPFPFSEGKMFVLTIQAGVEGYHINVGGRHVASFPHRMEFALEDATGL
AVTGGIDVHYVYATALPRAHPSFSLQQVLEMSEKWKSRHVPEEPIQLFVGILSTTNHFAE
RMAIRKTWMQFPAIKLGNVVARFFVALSHRKEINAALKKEAEYFGDIVILPFIDRYELVV
LKTVAICQYGVQNVTADYIMKCDDDTFVWLDIVLQQITTYNRTLPLYLGNLNLLHRPLRS
GKWAVTYEEWPEAVYPPYANGPGYVLSIDIARDIASRHANHSLRLFKMEDVSMGMWVEDY
NATAAVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWDKLSAGRARCCNYR
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgcgcgcagctccgaggtgttcctcggcgccggccggctgcgcgcgcgccgg
cgcctggcgccgctcctcgccgcggcggcgttcgcgtacctcctcttcgtgtccgtcaag
ctcgccggcttcggcagtgcgggcccagcggcggccgtcagccgcctgcccgccgccggc
gcgggcaagccgctgcggcggcgggtggagcagccggctccccgcgcgcgagccgccgcc
gcggtgtccgggtacggccgcatcaccggggagatcctccggcggcgggaggcgggcgag
gggcggcggaggaggtggggccagctggggaacttcacggagctcgagcgcacggccgcc
gaggcgtgggcgctcggggccagggcgtgggaggaggcgtccgcgttcacgggcgacgtc
gactcccgcggcgcgggggaggacccggccgagtgcccggggtcgctcgcgctcggcggg
ggcgaggcggcggcggcggcgttcctgccgtgcgggctggcggccgggtcggcggtgacg
gtggtgggcacggcgcgggcggcgcggccggagtacgtcgaggcgctggagcggagcagc
gcggggaacgggaccgtgatggtggcgcagttcgcggtggagctccgcgggctgcgcgcc
gccgacggcgaggagccgcccaggatactgcacctcaacccgcggctgcgcggggactgg
agcggccggcccgtgctcgagatgaacacctgcttcaggatgcagtggggcagggcgcag
cgctgtgatggcaccccctcgagagacgatgaccaggttgatggattcagaaaatgtgag
aaatggcagcggcaggacatagttgaatcaaaagaaacaaagactagctcatggttcaac
aggtttatcggccgagcaaagaaaccagaaatgacatggccattcccattttcagaggga
aagatgtttgttctcactatccaagctggtgtggaaggataccatattaacgtgggaggc
cgccatgttgcctcatttcctcataggatggaatttgctcttgaagatgcgacaggttta
gccgtaacagggggcatagatgttcactatgtgtacgcaacagctcttccaagggcccat
cctagtttttctctgcaacaagtattggaaatgtctgaaaagtggaagtctcgccatgtg
ccagaggaaccaattcagcttttcgttggcatcctctctactacaaaccattttgccgag
cgcatggctattaggaaaacctggatgcaatttccagccattaaattgggaaatgtagtt
gctcggttctttgtcgcactgagccatagaaaggagataaatgcagccctaaagaaggaa
gctgaatattttggagatatagtcattctgccatttatcgaccggtatgagctggtggtt
ctgaaaacagtagcgatatgtcaatatggggtgcaaaatgttactgcagattacatcatg
aagtgtgatgacgacacctttgtgtggctggatatcgtattgcaacaaatcactacctac
aacagaaccttacctctttatcttggcaacttgaatctattgcacaggcctctaagaagt
ggcaagtgggctgtgacctatgaggaatggcctgaagctgtgtatcccccgtatgccaat
ggacctggttatgtcctctcaatcgacattgcgagagacatagcatcccggcatgcaaat
cactccctgaggctgttcaagatggaggacgtgagcatgggcatgtgggtggaggactac
aacgccactgccgcggtgcagtacgtccatagctggaggttctgccagttcggctgtgtg
gataactacttcacagcacattaccagtcccccaggcagatgctatgcctctgggataaa
ctgtcagccggccgagcacgctgctgtaactacagataa
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