Panicum virgatum (switchgrass): 120700159
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Entry
120700159 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120700159
KO
K14565
nucleolar protein 58
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120700159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120700159
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
120700159
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
L544_helical
Nop
NOP5NT
Motif
Other DBs
NCBI-GeneID:
120700159
NCBI-ProteinID:
XP_039840297
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All DBs
Position
3K:complement(62296699..62299905)
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AA seq
319 aa
AA seq
DB search
MALDLSSLEMVALLETPTGFAFFHVYENLCKGPKNLWSWFINDEVADNVIFLLEFIKFED
KSVAWKSGGPGLLLTRAIKKYCGKSIQLIVGDVELRGVIKSNLNVKCFENEDVIFELMWG
LKHVLSYYVRQERGNITLEYRLPLSQGLKDCMSKYEVIIPTEAIDRTFVGCASALHRCDV
LLEHYRKRLPEICEPFLPGIREIVNGDIPYAEVVAKILTPDRVQDCNPFEGLSDDVVKKI
KDVAANNAGKKVDRAKHRLIYGIARDVRKFPGYRTDLLQTLKSLADKRSGRQKRSQTEIL
NGQAAKMDTVLVLMLMVYA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcactggatctcagttcattggagatggtggccctgctggagacgccaactggtttc
gctttcttccatgtctacgagaatttatgcaaaggaccaaagaatctgtggtcgtggttt
atcaatgatgaagttgctgataatgttatctttctgcttgagttcataaagtttgaagac
aagtctgttgcgtggaaaagtggtggtccaggtttgcttcttactcgtgcaatcaaaaaa
tactgtggcaaaagcatacagctgattgttggggatgtagagcttagaggtgtcatcaag
tccaatttgaatgtcaagtgctttgaaaacgaggatgttatttttgaactgatgtggggg
ttaaagcatgttctgtcttattacgttcgccaagaaagaggcaacatcactctcgagtat
cgtctcccattatctcaaggacttaaagactgcatgagtaaatatgaagtcattattcct
acagaagcaattgatagaacatttgtaggctgtgctagtgcattgcatcgatgtgatgta
ctgttggagcattacagaaagaggctgcctgagatatgtgaaccgtttcttcctggtatt
cgtgaaattgtcaatggtgacataccctatgcagaagttgtggcaaagattctgacccct
gacagggttcaagattgtaatcccttcgaggggttgtcggatgatgtggtaaagaagata
aaggatgttgcagcaaacaatgcaggaaaaaaggttgatcgtgccaagcatcgtcttata
tatggcattgctcgtgatgttaggaaatttccaggatatagaacggatttgcttcagaca
ctcaagtctttggctgataaacgttctggtcggcaaaagaggagccaaactgagatactt
aacggacaagcggccaagatggataccgtgctggtgctaatgctaatggtgtatgcgtga
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