Panicum virgatum (switchgrass): 120700288
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Entry
120700288 CDS
T07260
Name
(RefSeq) carotenoid 9,10(9',10')-cleavage dioxygenase-like isoform X1
KO
K00465
carotenoid 9,10(9',10')-cleavage dioxygenase 1 [EC:1.13.11.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
120700288
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Gene cluster
GFIT
Motif
Pfam:
RPE65
Motif
Other DBs
NCBI-GeneID:
120700288
NCBI-ProteinID:
XP_039840452
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Position
3K:64211248..64222452
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AA seq
542 aa
AA seq
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MGAAEAEQPNGLVVVPEPRPIKGLASWALDLLESVAVRLGHDKAKPLHWLSGNFGPVVDE
TPPAPDLPVRGHLPECLNGEFVRVGPNPKFVPVAGYHWFDGDGMIHAMRIKDGKATYVSR
YVKTARLKQEEYFGGAKFMKIGDLKGFFGLFMVQMQQLRKKFKVLDFTYGFGTANTALIY
HHGKLMALSEADKPYVVKVLEDGDLQTLGLLDYDKRLKHSFTAHPKVDPFTDEMFTFGYS
HEPPYCTYRVITKDGSMLDPVPITIPESVMMHDFAITENYSIFMDLPLLFRPKEMVKNGE
FIYKFDPTKKARFGILPRYAKDDKLIRWFELPNCFIFHNANAWEEGDEVVLVTCRLENPD
LDKVNGHQSEKLENFGNELYEMRFNMKTGVSSQKQLSVSAVDFPRVNESYTGRKQRYVYC
TILDSIAKVTGIIKFDLHAEPESGKKELEVGGNIQGIYDLGPGRFGSEAIFVPKQPGVSG
GEDDGYLIFFVHDENTGKSEVNVIDAKTMSADPVAVVELPNRVPYGFHAFFVTEEQLAQQ
AE
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggcggaggcggagcagcccaacggcctcgtcgtggtgccggagccgcgcccg
atcaagggcctggcctcctgggcgctcgacctgctcgagtccgtcgccgtgcgactcggc
cacgacaaggccaagccgctccactggctatcaggcaactttggccccgtcgtcgacgag
actccgccggcccctgacctccccgtccgcggacacctcccggagtgcttgaatggagag
tttgtcagggtcgggcccaatcccaagtttgtcccagtcgcagggtatcactggtttgac
ggagatggaatgattcatgccatgcgtattaaggatggaaaagctacctatgtatcaaga
tatgtgaagacggctcgcctcaagcaggaagagtattttggcggagcgaagtttatgaag
attggagatctaaagggattctttggattgttcatggttcaaatgcaacaacttcgtaaa
aaattcaaagtcttggattttacctatggatttgggacagctaatactgcacttatatat
catcatggtaaactcatggccttgtcagaagcagataagccctatgtagttaaggtcctt
gaagatggagacttgcagactcttggtttgttggattatgacaaaaggctgaaacattct
ttcactgcccatccaaaagttgatccatttacagatgaaatgttcacctttggatactca
catgagcctccttactgtacataccgtgtaattaccaaagatgggtctatgcttgatcct
gtgccaataacaataccagaatctgtaatgatgcatgactttgccatcacagagaattat
tctattttcatggatctccctttattgttccgaccaaaggaaatggtgaagaatggtgag
tttatttacaagtttgatcctacaaagaaagctcgctttggtattctcccacgctatgcc
aaggatgacaaactcataagatggtttgaactccccaattgcttcatattccacaatgct
aatgcttgggaagagggtgatgaagttgttctcgttacctgccgccttgagaatcctgat
ttggacaaggtgaacgggcatcaaagtgaaaagctcgagaacttcgggaatgagctgtac
gagatgagattcaacatgaaaactggagtttcttcacagaagcaactgtcagtttctgct
gtagattttcctcgtgttaatgagagctatactggcaggaagcagcgttatgtctactgc
actatactggatagcatcgcgaaggtgactggcatcataaaattcgatctgcatgctgaa
ccggagagtggtaagaaggaacttgaagtaggaggaaatatacagggcatatatgacctg
ggacccggtagattcggttcagaggcgatttttgttcccaagcagccaggtgtatctgga
ggagaagacgatggctatttgatattctttgtgcacgatgaaaacacagggaaatctgaa
gtaaatgttatagacgcgaagacaatgtctgctgatccagttgcagtggttgagcttcct
aacagggttccttatggattccatgccttcttcgtaaccgaggaacaactggcgcaacaa
gcagagtag
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