Panicum virgatum (switchgrass): 120700299
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Entry
120700299 CDS
T07260
Name
(RefSeq) F-box/LRR-repeat protein 3-like
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120700299
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120700299
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GFIT
Motif
Pfam:
LRR_4
LRR_6
DUF7885
LRR_At5g56370
LRR_8
LRR_14
LRR_At1g61320_AtMIF1
LRR_Zer-1
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
120700299
NCBI-ProteinID:
XP_039840463
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All DBs
Position
3K:344681..361229
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AA seq
395 aa
AA seq
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MAAAAAHCHNKRRRLSLPPTTTAPPLDSLADELLFHVLDRVAAADPRALKSFALASRACH
AAESHHRRLLRSLRAHLLPAALARYPSASRLDLSLCARVPDAALAAVPSGSSIRALDLSR
SRGFGTAGLAALAGACPDLADLDLSNGVHLGDAAAAEVARMRSLRRLSLSRCKPLTDMGL
VCVAIGCPDLRELSLKWCLGVTDMGLHLLALKCRKLTTLDISYTMITKESFLAIMKLPNL
QVLTLVGCIGIDDDALGSLDKECSKSLQVLDMSHCQNVTDVGVSSMVKSIPNLLELNLSY
CCPVTPSMGRSLQKITKLRTLKLEGCKFMADGLKGIGSSCVSIRELSLSKCSGVAALRGS
LVLEDGLERKEKWLRWNLVMYGSNSHKMCLYDEKA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgcagcccactgccacaacaagcgccgccgcctctccctgccccccacc
accaccgcgccccctctggactcgctcgccgacgagctcctcttccacgtcctcgaccgc
gtcgccgccgccgacccgcgtgcgctcaagtccttcgccctcgcctcccgcgcctgccac
gccgccgagtcccaccaccgccgcctcctccgctcgctccgcgcccacctcctcccggcc
gcgctcgcccgctacccctccgcctcccgcctcgacctctccctctgcgcgcgcgtcccc
gacgccgccctcgccgccgtcccctccggatcatccatccgcgccctcgacctctcccgc
tccagggggttcggcactgcgggcctcgccgcgcttgccggggcatgcccggacctcgcc
gacctcgacctctccaatggggtccatcttggggacgccgccgcggccgaggtggcgcgg
atgcggagcctccggaggctgtctctctcgcgctgcaagccactcaccgacatggggctt
gtctgcgtcgccatcggctgccccgacctcagggaactctcgctcaagtggtgcctgggg
gtcacggatatggggctccacctcctcgccctcaagtgcaggaaactcaccaccctggat
atctcctacaccatgatcacaaaagagagctttcttgccatcatgaagctacccaatctc
caggtgttgacactggttgggtgtattggaattgatgatgacgctcttggcagtcttgac
aaagagtgcagtaaatcactacaggttcttgatatgtctcattgtcagaatgtcactgat
gtgggagtttcgtcgatggtgaagtcaataccgaatctattggaactgaatctttcgtac
tgctgtcctgttactccttctatggggagaagcctccaaaagattactaaactgcggacg
ctgaagctggaaggctgcaaattcatggctgatggactaaaaggcattggaagctcttgt
gtttctatcagggagctaagtctgagcaagtgctctggagtagcagcacttaggggtagt
ctagttttagaggatggcttggagagaaaggaaaagtggttgaggtggaaccttgtgatg
tatggaagcaacagtcacaagatgtgcttgtacgatgagaaggcctga
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