Panicum virgatum (switchgrass): 120700474
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Entry
120700474 CDS
T07260
Name
(RefSeq) RGG repeats nuclear RNA binding protein A-like
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120700474
Spliceosome [BR:
pvir03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120700474
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Motif
Other DBs
NCBI-GeneID:
120700474
NCBI-ProteinID:
XP_039840666
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All DBs
Position
3K:complement(13401859..13405394)
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AA seq
372 aa
AA seq
DB search
MASRNQFDLLGDVDNDDPAHLLAAAEKKAAAAPKPAPAPAKLPTKPPPPAQAMREVRNYG
APPRDGAGRGGPGRGRGGHSGRTGPRRDFGDADANGFEGGYGGGFGDGGVARGENGDGRQ
AERGRGPRQPYRGGGCRGGYADGQAGDEFGRPRQAYERHSGTGRGYEMKREGAGRGNWGT
VTDESLAQDAVEAVNVEETTAAAEDEKKPEDAPQPEVEKDMEGVENEEEEKEPEDKEMTL
EEYEKVLEEKRKALLALKAEERKVEIDKELRSMQQLSVKKNADEVFIKLGSDKDLKKKEN
VERDERAKKSLSINEFLKPAEGERYYNPIGRGRGRGRGRGDRGGFRGDYNGSYWGPASAP
AIEDQAQFPALA
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaggaaccaattcgatctccttggggatgtcgacaacgacgaccccgcccac
ctcctcgctgccgccgagaagaaggcggcagcggcgcccaagccggcgcccgcgccggcc
aagttgcccaccaaacctccgccgcccgcgcaggctatgagggaggtcaggaactatggt
gctccgccacgcgatggagctggacgtggtggtccaggacgtggaagaggcggccatagt
ggcaggactggcccaaggcgagatttcggcgatgctgatgccaatggcttcgagggaggg
tatggtggtggctttggagatgggggagtggctcgtggtgaaaacggtgatgggaggcag
gcagagaggggccgcggaccacgccaaccttaccgtggaggcggctgtcgtggtggctat
gctgatgggcaggccggggatgagtttgggcgtccacgacaggcatatgaacgccacagc
ggcactggccgtggctatgagatgaagcgcgagggggcaggacgtggcaattggggaact
gtaactgatgaaagccttgcacaggacgctgtggaagctgtaaatgttgaggagactact
gctgcagctgaggatgagaagaagcctgaagatgcaccacagcccgaggttgagaaagac
atggagggtgtggagaatgaagaggaagaaaaggaacctgaggataaggagatgactctg
gaggaatatgagaaagtactggaggagaaacggaaagctctgcttgcccttaaggctgag
gagagaaaagttgaaattgataaagagctgcggtccatgcaacaactgtcagttaaaaag
aatgctgatgaagtgtttatcaagctgggctctgacaaggacttgaaaaagaaagaaaat
gtggaaagagatgagcgtgcaaagaagtccctgagcatcaatgaattcttgaagccggct
gaaggtgagaggtactacaaccccattggccgcgggcgtggccgcggcaggggccgtggt
gaccgtgggggattccgtggagattacaacggtagttattggggaccagcttctgctcca
gcgatcgaagaccaggctcagttccctgccctggcctaa
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