Panicum virgatum (switchgrass): 120700599
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Entry
120700599 CDS
T07260
Name
(RefSeq) autophagy-related protein 18d-like
KO
K22991
WD repeat-containing protein 45
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120700599
Membrane trafficking [BR:
pvir04131
]
Autophagy
Other autophagy associated proteins
Others
120700599
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
BCAS3_WD40
Beta-prop_IFT122_1st
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_WDR3_2nd
Beta-prop_RSE1_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_Vps41
CFAP251_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
WD40_Gbeta
Beta-prop_IFT140_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
Beta-prop_NOL10_N
NBCH_WD40
Beta-prop_HPS5
Beta-prop_WDR19_2nd
Ge1_WD40
Beta-prop_Aladin
Motif
Other DBs
NCBI-GeneID:
120700599
NCBI-ProteinID:
XP_039840782
LinkDB
All DBs
Position
3K:11371218..11373418
Genome browser
AA seq
411 aa
AA seq
DB search
MAHAAVAAGSSAVDADDASFRLLSVSWNQDSSCFTAATTADFRVFSCAPFRESLRRVLPS
GGGGGYAIVEMLFRSSLFALVAAGEAGRHRVELWDDSKNRRVGDITGIRSAVRAVRLSTA
YLAVVLDRTVRVYELGDLARPLWKIPTALNPRGLCCLSSSHAGAPGSGVLACPGTARGQV
RVEDLRKEQAATRLIAAHSSEIACMAMTTDGAVLATASVKGTLVRVFSTMDGTCLQEVRR
GRDQADIHSIALSPNLRWLAVCSDKGTLHVFSLRVRDAGGNQSAAAGSTVQTNTASNARS
SLSFMKGILPDYFSSEWSFAQFRLPETIRYVAAFGEHNTVMVIGMDGSFYRCGFDPVNDG
KEMVRKEYFRFLKDKDSPPIRTLEKNTMIELHDVRRTPYARKVHSRFHVYI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcccacgccgccgtagccgcgggctccagtgcggtcgacgccgacgacgccagcttc
cggctgctgtcggtctcctggaaccaggacagcagctgcttcacggcggcgacgaccgca
gacttccgcgtcttcagctgcgccccgttccgggagagcctgcgccgcgtcctccccagc
ggcggcggcggcgggtacgccatcgtcgagatgctgttccgcagcagcctcttcgcgctg
gtcgccgcgggcgaggccgggaggcacagggtcgagctctgggacgacagcaagaacagg
cgcgtcggcgacatcaccggcatccgttccgccgtccgcgccgtccggctgtcgacggcc
tacctcgccgtcgtcctcgaccggacggtcagggtgtacgagctgggcgacctggcgcgg
ccgctctggaagatccccacggcgctcaacccgcgcgggctctgctgcctctcctcctcc
cacgccggcgcgcccggttccggcgtgctggcctgccccgggacggcgcgcgggcaggtc
cgcgtcgaggacctgcgcaaggagcaggcggcgacgaggctcatcgcggcgcacagctcg
gagatcgcgtgcatggcgatgaccacggacggagctgtgctggccacggccagcgtcaag
ggcaccctcgtcagggtgttcagcaccatggacgggacttgtttgcaggaggtgcgtaga
gggcgtgaccaagctgacatccatagcattgcgctgtcgccgaatctgcggtggttggcg
gtgtgcagcgacaaaggaaccttgcatgtcttcagcctgagagttagagatgcaggtggc
aaccaatctgccgcagcaggttcaaccgtgcagacgaacaccgcttccaatgcaagatca
tccttgtctttcatgaaagggattctgccggactatttcagctcagaatggtcattcgcc
cagtttcgtctacctgaaaccatacgctacgttgcagcatttggagaacacaacactgtg
atggttattgggatggacggaagtttctacagatgcggctttgaccctgtaaatgatggc
aaggagatggtgcggaaggaatatttccggttcctcaaggataaggactctcctccaatt
aggactttagaaaaaaacaccatgatcgagcttcatgatgtcaggaggactccttatgca
aggaaggttcactctcggttccatgtgtatatttag
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