Panicum virgatum (switchgrass): 120700637
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Entry
120700637 CDS
T07260
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit D-like
KO
K03251
translation initiation factor 3 subunit D
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pvir03012
]
120700637
Translation factors [BR:
pvir03012
]
Eukaryotic type
Initiation factors
eIF-3
120700637
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
eIF-3_zeta
Endosulfine
NARG2_C
NTP_transf_8
Motif
Other DBs
NCBI-GeneID:
120700637
NCBI-ProteinID:
XP_039840819
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All DBs
Position
3K:15410074..15417547
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AA seq
670 aa
AA seq
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MFGSERVELMRAEIERLVEQNVVLKKCTSLNTSASRCVCGLLVGLPPSPFLPQVTESDSL
SSLSLSLQAATTGEWRRPCKFFVGRFAGRQAGLSIVKYSMSEKPSDAATGDVRPEGIVSD
EKVEGSDQNERDGMPSPQQEEAAIKKKYGGIMPRKTPLISKDHERAYFDSADWALGKQGG
NPQKPKGPLEALRPKLQRPQLPQRQDEEVEARRRLAEKERARRDRHFQNNRSHHHPGFRG
NQSSSSAKPSVDIQPDWTMREQIPFANFTKLSFSVADQPEDLLLCGAVEFYDRAYDRVNP
KAPRRLERFKSRNFFKVTTTDDPVIRRLAEEDKATVFATDAILAALMCTPRSIQSWDIVV
QRVGNKLFFDKRDGSQLDLLTVNETAQEQLPENKEDINSAHSLAVEATYINQNFSQQVLH
REGEKVTFDEPNPFASAGEEAASVGYQYRRWKLDDEISLVARCEVHAVNADPSGGRQFLT
LNALNEFDPKITGVDWRQKLETQRGAVLATELKNNANKLARWTAQALLSGADMMKLGYVS
RVHPRDHYNHSVLTVMGYKPRDFAAQINLNTANMWGIVKSIVDICMKFEEGKYVFVKDPA
KPQVRIYEVPSDAFENDYVEEPLPEEEQVRPLADVDATAQEMDAAAEAEANGALVANSGE
DDKVAEATAA
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttcagagcgggtggagctgatgcgggcggagatcgagaggctcgtggagcag
aacgtggtgttgaagaagtgcacatcattaaacacatctgcctcacgctgcgtttgtggg
cttctcgtgggtctcccgccctccccctttctgcctcaagtcactgaatctgattccctc
tcctctctctctctctctctccaagcggcgacgacaggggagtggcgccgcccttgcaag
ttcttcgtcggacgcttcgccgggcgacaagctggtctgagcatcgttaagtacagtatg
tcggagaaaccatctgatgctgcaactggtgatgtgaggcctgaaggaattgtttctgat
gagaaagtggaaggttctgatcagaatgaaagagatggtatgccttcgccacaacaagag
gaagcagcgatcaagaaaaagtatggagggataatgcccagaaagacaccacttatttcc
aaggaccatgagcgagcgtactttgattctgctgattgggctttggggaagcaaggagga
aatcctcaaaaacctaaaggaccgctcgaagcacttcgaccaaaattacagcgcccgcag
ctcccccagcgccaggacgaggaggtggaggcgcgccgccgcctggccgagaaggagcgc
gcccgccgggaccgccacttccagaacaaccgctcacaccaccaccccggcttccggggc
aaccagtcctcgtcgtcggccaagccctccgtcgacatccagcccgactggaccatgcgt
gagcagatccccttcgccaacttcaccaagctctccttctccgtcgccgaccagcccgag
gacctcctcctctgcggcgctgtcgagttctacgaccgcgcctatgaccgcgtcaacccc
aaggccccgcgccgtctcgagcggttcaagtcccgcaacttcttcaaggtcaccaccacc
gacgatcctgtcatccgccgcctcgccgaggaggacaaagccacggtgttcgccactgat
gccatcctcgccgcgctcatgtgcacgccgcgcagcatccaatcatgggacattgtcgtc
cagcgcgtgggcaacaaactcttctttgacaagcgtgatggctcccagcttgacctgctc
acagtcaatgagactgcacaggagcagctccctgagaacaaggaggacatcaactcagcg
cactcactcgctgttgaggccacctacatcaaccagaacttctcgcagcaggtgttgcac
cgtgaaggtgagaaggttacctttgatgagcctaacccttttgcttctgcgggtgaggag
gcagcatctgttggctaccaatatcgccgctggaagctggatgatgagatcagccttgtt
gctcgttgtgaggtgcatgctgtcaatgctgatccaagtggtggtcgccagttccttacg
ctcaatgctctcaatgagtttgatcctaagattactggtgttgactggaggcagaagctt
gagacccagcgtggggctgtccttgctacagagctcaagaacaatgcgaacaaacttgct
cgctggactgcccaggctttgctttctggtgctgacatgatgaagttgggctatgtgtca
cgtgtgcatccacgcgatcactacaaccattctgtactcactgtaatggggtacaagcca
agggattttgctgcacagatcaacctcaatactgctaacatgtggggaatcgtcaagtca
attgtggacatttgcatgaagtttgaagagggcaagtatgtgtttgtgaaagatccagca
aagccacaggttaggatctatgaggtgccctctgatgcattcgagaatgattatgttgaa
gagccacttccagaggaggagcaggttcgcccgcttgcagatgttgatgccacggcacaa
gaaatggatgcagccgctgaggcagaggccaatggtgcattggttgctaacagtggtgag
gatgataaggttgcagaggctactgctgcttga
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