Panicum virgatum (switchgrass): 120700882
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Entry
120700882 CDS
T07260
Name
(RefSeq) oligoribonuclease-like
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120700882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120700882
03009 Ribosome biogenesis [BR:
pvir03009
]
120700882
Messenger RNA biogenesis [BR:
pvir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
120700882
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-60S particles
RNases
120700882
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
BSH_Fcp1
Motif
Other DBs
NCBI-GeneID:
120700882
NCBI-ProteinID:
XP_039841022
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All DBs
Position
1K:complement(27777778..27782823)
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AA seq
103 aa
AA seq
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MHWQVLDFVRRHISSGTPLLAGNSVYVDLLFLKKYMPQLAAIFSHVIVDVSSVMALCMRW
YPKERKQTPRKQKAHRAMDDIKESIRELKYYKDNIFKPQKSKR
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgcattggcaggtgttagacttcgttaggaggcatataagttcaggcaccccattatta
gctgggaattctgtttatgtggatttattatttctgaagaagtatatgccacagcttgca
gccattttctctcatgtaattgttgatgtgagtagtgtgatggctctgtgcatgcgatgg
tatcccaaagaaaggaagcaaactccaagaaagcagaaggcccacagggcaatggatgat
atcaaagaaagcatcagagaactaaagtactacaaggacaacattttcaaaccacagaaa
tccaagcggtag
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