Panicum virgatum (switchgrass): 120701317
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Entry
120701317 CDS
T07260
Name
(RefSeq) protein SCARECROW-like
KO
K27742
protein SCARECROW
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120701317
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
GRAS
120701317
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
120701317
NCBI-ProteinID:
XP_039841354
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Position
3K:complement(21393533..21395377)
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AA seq
494 aa
AA seq
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MSTGRGGSSDMQDSLSLMQFHDPYLYSGSAVSANLPLSSSHSFLPHRQDFVHTGDRCSGK
DVPEFVDQAAAEVSGEQELAVSKEVHEGGGDAAVEEQDGAATARGEEEAHGVRMIALLME
CAVAVSVGNLADANGMLLELAQMASPYASSCGERLVAYFTKAMAARLMSSWVGICAPLAP
PCAAVHAAFRAFYNVSPLARFAYLACNQAILEAFHSKRLVHIVDLDVVPGGALQWLSLLP
ALAARPGGPPLLRVTGFGMSASALHDTGNQLAGLASKLSIPFEFYAVAKRPGDVDAVAAV
PSRRPGEALAVHWLRHAMYDAAGDDGATMRLVRWLEPKMLTLVEQERGGAPGDGGGGGAG
HEHGHFLGRFVSALHHYSALFDSLGASRPADEDASRHLVEHGVLGREIGNVLAVGGPSRS
GRDKLGCWQAELARHGFLRAGGAGRAQLVAGACPAGLGSTVADDHDGTVRLGWKGTPLYA
VSTWTWCPSPHAQR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaggaaggggcggctcatcagacatgcaggattctctaagcttgatgcagttc
catgatccgtacctctacagcggcagcgctgtcagcgccaacctgccactgtcgtcgtcg
cactctttcttgcctcatcgccaagattttgttcataccggtgaccgctgctctggcaag
gacgtgccggagttcgtcgaccaggccgcggccgaggtaagcggcgagcaggagttggca
gtaagcaaggaggttcacgagggaggaggtgatgccgcggtggaggagcaggacggggcg
gcgacggccaggggcgaggaggaggcccacggcgtgcggatgatcgcgctgctcatggag
tgcgcggtggccgtgtccgtgggcaacctcgccgacgccaacgggatgctcctggagctt
gcgcagatggcgtccccgtacgcgtcgtcgtgcggggagcggctcgtggcctacttcacc
aaggccatggcggcgcggctgatgagctcgtgggtcggcatctgcgcgccgctggcgcca
ccgtgcgccgccgtccacgccgcgttcagggccttctacaacgtgtcgccgctggcgagg
ttcgcctacctggcgtgcaaccaggccatcctggaggcgttccacagcaagcgcctcgtc
cacattgtggacctcgacgtcgtgcccggcggcgcgctccagtggctctcgctcctcccg
gccctggcggcgcggcccggcggcccgcctttgctccgcgtgaccgggttcggcatgtcg
gcgtcggcgctccacgacaccggcaaccagctcgccggcctggcgagcaagctgagcatc
ccgttcgagttctacgccgtcgcgaagcggcccggggacgtcgacgcggtggcggccgtg
cccagcaggaggccgggggaggccctggccgtgcactggctgcggcacgccatgtacgac
gcggccggggacgacggcgccaccatgcggctggtgcggtggctggagcccaagatgctg
acgctggtggagcaggagcggggcggggcgcccggggacggcggcggcggcggcgcgggc
cacgagcacggccacttcctgggccggttcgtctccgcgctgcaccactactcggcgctg
ttcgactcgctgggcgcgtcgcggccggccgacgaggacgcgagcaggcacctggtggag
cacggcgtgctcggcagggagatcgggaacgtgctggcagtgggcgggccgtcgcggagc
gggcgggacaagctgggctgctggcaggcggagctcgcccggcacgggttcctgcgcgcc
ggaggagccgggcgggcgcagctggtggccggggcgtgcccggcggggctgggctccacg
gtggcggacgaccacgacggcacggtgcggctggggtggaagggcacgccgctgtacgcg
gtctccacgtggacgtggtgcccctcgccccacgcgcagcgttaa
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