KEGG   Panicum virgatum (switchgrass): 120701339
Entry
120701339         CDS       T07260                                 
Name
(RefSeq) signal recognition particle 54 kDa protein 2-like
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03060  Protein export
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    120701339
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pvir02044]
    120701339
Enzymes [BR:pvir01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     120701339
Secretion system [BR:pvir02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   120701339
  Eukaryotic Sec-SRP protein
   120701339
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N cobW Fe-ADH AAA_17 Zeta_toxin AAA_22 nSTAND3 ResIII AAA_33 AAA_19 AAA_16 MMR_HSR1 NTPase_1 ATP_bind_1 AAA_30 DO-GTPase2 APS_kinase NPHP3_N Methyltransf_24
Other DBs
NCBI-GeneID: 120701339
NCBI-ProteinID: XP_039841372
LinkDB
Position
3K:23352401..23353843
AA seq 480 aa
MVLAQLGGSIARALARMKDATVVDDKVLADCLNEISRALLQADVRFETVRDVKANIKSIV
SLDALAAGTDKRRVIQKAVVGELCRMLDPGKPAFTPGKGKPSVVMFVGLQGSGKTTTCTK
YADYYRRKGFSPALVCADTFRAGAFDQLKQNASKAKIPFHGSYIVSDPVKIAVEGVDRFR
NEKCDLIIVDTSGRHKQEAALFEEMRQISEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA
SVGAVIVTKMDGHAKGGGALSAVAATRSPIIFIGTGEHIPDFEAFDVKPFVSRLLGMGDL
SGLMDKIQNVMPADELLPKLTEGAFTLRLLYEMFQNLQNMGSLGQLFSMIPGLPAQFIEK
GKEKEGQAKIKRYMTIMDSMTEKELDNTYPKLMNESRMKRIARGSGRPVNEVVDVLEEHK
RIAKMWSKLPFQNIKRPSTNNRDSLKQLVNALPPNMLNQLGELNGLQNMMKQIGSKKKMS
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggtgctcgcgcagctgggcgggagcatcgcccgcgcgctcgctcgaatgaaggacgcg
accgtcgtcgacgacaaagtgctcgcggactgcctcaacgagatctcgcgcgcgctcctg
caggctgacgtccgcttcgagacggtgcgcgacgtcaaggccaacatcaagagcatcgtc
agcctcgacgcgctcgccgcgggcaccgacaagcgccgcgtcatacagaaggccgtcgtc
ggtgagctgtgcagaatgctggatccagggaagccggccttcacccccggcaaagggaag
cccagcgtggtcatgttcgtcggcttgcagggttccggaaaaaccactacttgcacaaag
tatgcagattattatcggcggaaaggatttagtccggcacttgtttgtgccgatacattc
cgagccggtgcttttgatcagctgaaacagaatgcatcaaaagccaagatacccttccac
ggaagctacatcgtatcagatccggtgaaaatcgctgtcgagggtgtggatagattcagg
aacgaaaagtgtgatctcattattgtagatacaagtggacgtcacaaacaggaagctgct
ctctttgaagaaatgcgccaaatttcagaggctacgaaaccagacctagtgatatttgtg
atggatggtagtattggtcaggctgcatttgatcaggcacaagcatttaaacagagtgct
tcagttggtgcggttattgttacaaaaatggatgggcatgcaaaaggcgggggtgcactt
agcgcggttgcagctacaagaagcccaatcatatttattggaactggagagcatattcca
gattttgaagccttcgatgtgaaaccatttgttagtcgcctgttaggcatgggagacttg
tctggcttgatggacaagattcaaaatgttatgccagctgatgaactcttgccgaagctg
actgaaggagctttcactctcagacttctttatgagatgttccagaatctccagaatatg
ggttctctagggcagctcttttctatgatacctggtcttcctgcccagtttattgaaaaa
ggaaaggaaaaggaaggtcaagcaaagattaagcggtacatgacgatcatggactccatg
actgaaaaagagcttgacaacacgtacccaaagttgatgaatgagtcgcggatgaaacgt
atcgctcggggatctggcagacccgtcaatgaagtggtggacgtgctggaggagcacaag
cgaattgccaaaatgtggagcaaattgccgttccagaatatcaagagaccaagtactaac
aaccgtgactcactaaagcagttagtcaatgcgctccctccaaatatgctgaatcagctg
ggtgaactaaatggcctacagaatatgatgaaacaaataggttctaaaaaaaagatgagc
tga

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