Panicum virgatum (switchgrass): 120701346
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Entry
120701346 CDS
T07260
Name
(RefSeq) protein YIP4b-like
KO
K22943
protein YIPF6
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120701346
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
YIPF proteins
120701346
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Yip1
DUF6611
Motif
Other DBs
NCBI-GeneID:
120701346
NCBI-ProteinID:
XP_039841374
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Position
3K:24588730..24592414
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AA seq
277 aa
AA seq
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MSHPLHPSSARSDMDEIETLARAAPPQAAVAPAASAARPASPPRASIPVSSSALPALPPA
ARLPFSAAAPPGSIVPAPVVSGSIAVPIASDGFGGPEPASRTLTEPVWDTVKRDLHRAVS
NLMLVVFPNPFREDPGKALRDWDLWGPFFFIVSLGLILSWSATAGKSQVFAVAFAVLAAG
AIVLTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLNDSVMLKIVVVMVTLAWSSW
AAYPFMSAAVNPRRKALALYPVFLMYVSVGCLIIAID
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaccccctccacccctcgtcggcgcggtccgacatggacgagatcgagaccctc
gcccgcgccgcgccgccccaggccgccgtcgcccccgcggcctccgcggcgcggcccgca
tccccgccccgcgcctccatccccgtctcctcctccgcgctccccgcgctcccgcccgca
gccaggctcccgttctccgccgcggcaccgccgggctccatcgtccccgcccccgtcgtc
tcgggctccatcgccgtccccatcgcctccgacgggttcggcggccccgagcccgccagt
cgcacgctcaccgagcccgtctgggacaccgtcaagcgggacctccaccgcgccgtcagc
aacctcatgctcgtcgtcttccccaacccgttccgcgaggacccgggcaaggcgctgcgc
gactgggacctctggggccccttcttcttcatcgtctcgctcgggctcatcctctcctgg
tcggccaccgccggcaagtctcaagtgtttgcagttgcctttgctgtattagctgctggc
gctatagttctcacgctcaatgttctactgctgggtgggcacatcatcttcttccaaagc
ctcagccttcttggatactgcctgttccccctggatgtcggggctctgatatgcatgctg
aatgacagtgtcatgctaaagatagttgtggtgatggtaacattggcatggagctcctgg
gcagcatacccattcatgagtgctgctgtcaacccgcggagaaaggccctagcgctgtat
cctgtgttcctaatgtatgtctcagttgggtgtctcataatcgcaatagattaa
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