KEGG   Panicum virgatum (switchgrass): 120701375
Entry
120701375         CDS       T07260                                 
Name
(RefSeq) SKP1-like protein 14
  KO
K03094  S-phase kinase-associated protein 1
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03083  Polycomb repressive complex
pvir04120  Ubiquitin mediated proteolysis
pvir04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120701375
   04120 Ubiquitin mediated proteolysis
    120701375
  09126 Chromosome
   03083 Polycomb repressive complex
    120701375
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120701375
   04121 Ubiquitin system [BR:pvir04121]
    120701375
   03036 Chromosome and associated proteins [BR:pvir03036]
    120701375
Membrane trafficking [BR:pvir04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    120701375
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     120701375
   Cul7 complex
     120701375
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     120701375
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     120701375
SSDB
Motif
Pfam: Skp1 Skp1_POZ DUF5033
Other DBs
NCBI-GeneID: 120701375
NCBI-ProteinID: XP_039841387
LinkDB
Position
3K:complement(28077372..28078276)
AA seq 167 aa
MSSAEPESPAAVTMGTTSEEEEEKVVLRCCDGEEFAVAVSVARKYGTISNMIDDGCVEGG
VPLPNVKAPAMSMVLECLNREHGAAAEEAKRAFEKAFFEKMAKEALFEVTLAANYLHAEE
LLDAAMQCAAGRIRGKTVPELREYFGIENDFTPEEEEIRKENPWAFD
NT seq 504 nt   +upstreamnt  +downstreamnt
atgtcatcggccgagccggagagccccgccgccgtgacgatgggcaccacgtcggaggag
gaagaagagaaggtcgtgctgcgctgctgcgacggggaggagttcgcggtggcggtgtcc
gtcgcgaggaagtacgggacgatcagcaacatgatcgacgacggctgcgtggagggcggc
gtcccgctgccgaacgtcaaggccccggccatgtccatggtgctcgagtgcctcaacagg
gagcatggcgccgcggcggaggaggccaagagggcgttcgagaaggccttcttcgagaag
atggcgaaggaggcgctgttcgaggtgaccctggcggccaactacctccacgcggaggag
ctgctggacgcggcgatgcagtgcgccgccggcaggatcagggggaagacggtgccggag
ctccgggagtacttcggcatcgagaacgacttcacgccggaggaggaagagatcaggaag
gagaacccctgggcgttcgactga

DBGET integrated database retrieval system