Panicum virgatum (switchgrass): 120701380
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Entry
120701380 CDS
T07260
Name
(RefSeq) probable galacturonosyltransferase 4
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120701380
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120701380
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120701380
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120701380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Inhibitor_I29
Glyco_transf_24
Peptidase_C1
Motif
Other DBs
NCBI-GeneID:
120701380
NCBI-ProteinID:
XP_039841388
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All DBs
Position
1K:28534156..28542004
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AA seq
788 aa
AA seq
DB search
MAHHVLLLLLLLLSLAAAAAVAAADADADADAEDPLIRQAVPGGDDNDRDLNAESHFLSF
VQRFGKSYKDADEHAYRLSVFKSNLRRARRHQLLDPSAEHGITKFSDLTPAEFRRTYLGL
RKSRRALLRELGGSAHEAPVLPTDGLPEDFDWRDHGAVGPVKNQGAHYLATGKLEVLSEQ
QFVDCDHEGRGVKANKLNALPLETVSSLKEPVGIVFSDELGGLSKESTESEGQELPSRKA
GEHKSCVLSEVTAAADGIEVLEQVPRREAQDGGLVSTDSEEQEKTTGSQQQSSSEEILLE
TMPKQTSDKFVAENSLTARTDGKTKSFVLPDTRIRNIKDQLIKAKVYLGLGSIRANSQYL
KDLRQRIREVQKVLGDASKDTDLPKNANEKVKALEQMLIKGRQMQDDCSIVVKKLRAMLH
SAEEQLHAHKKQTVFLTQLAAKTLPKGLHCLPLRLANEYFSLDPDRQQFPNQHKLTNPKL
YHYALFSDNILATAVVVNSTVLNAKHPSDHVFHIVTDRLNYAPMRMWFLSNPPGKATIEV
QNIGEFTWLNDSYSPVLKQLGSQSMIDYYFGTNRANPDSNLKYRNPKYLSILNHLRFYLP
EIYPKLDKMVFLDDDIVVKKDLTGLWSINMKGKVNGAVETCGESFHRFDRYLNFSNHVIA
KNFDPHACGWAFGMNVFDLAEWKRQNITQIYHSWQKLNQDRSLWKLGTLPPGLITFWNKT
FPLSRSWHVLGLGYNPHVNSRDIERAAVIHYNGNMKPWLEIGLPKFQSYWSKYLDYDQPF
LQECNINP
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggctcatcacgtcctcctcctcctcctcctcctcctctccctcgccgcggcggccgcg
gtcgccgccgccgacgccgacgccgacgccgacgccgaggaccccctaatccgtcaggcg
gtgcccggcggcgacgacaacgaccgggatctgaacgcggagtcccacttcctgagcttc
gtgcagcggttcggcaagtcctacaaggacgccgacgagcacgcgtaccgactgtccgtg
ttcaagtccaacctgcgccgcgcgcgccgccaccagctgctggacccgtcggcggagcac
ggcatcaccaagttctccgacctgacgccggccgagttccgccggacctacctcggcctc
cgcaagtcccggcgcgcgctcctcagggagctcgggggctcggcgcacgaggcgcccgtg
ctccccaccgacggcctccccgaggacttcgactggagggaccacggcgccgtcggcccc
gtcaagaaccagggtgcgcactatctcgctaccggcaagctggaggtgctctccgagcag
cagtttgtcgactgcgaccatgagggccgtggcgtcaaggcaaacaagctgaatgcgctt
cctctggaaactgtgagctctttgaaagaacctgtcggcattgtcttctcggatgaactg
ggcgggttgtcgaaagaatcgactgaatctgaggggcaagaattgccatcgagaaaggca
ggggagcacaagagctgcgtgctctctgaagtcacggcggctgctgatggcatcgaagtg
ctcgagcaagtgccgaggcgggaggcacaggatggtggcttggtgagtaccgactcagaa
gagcaagagaaaaccaccggatcacagcagcaatcatcttcagaggaaattttactggag
actatgcctaaacagacatctgacaagtttgttgcggagaactccctaacagctagaaca
gatggtaaaactaaaagctttgttttgcctgatacgcggatccggaatatcaaggatcag
ttaatcaaggcaaaagtctaccttggccttggatccattagagcaaattcccagtaccta
aaagacttaaggcagaggatacgagaagtccaaaaggtgcttggtgatgcatctaaggac
actgatctaccaaagaatgcaaatgagaaggttaaagcactggagcagatgctgattaag
ggcagacagatgcaggatgattgttctattgttgtcaaaaagcttcgagctatgcttcac
tcagcagaggagcagctgcatgcacacaagaagcagactgtttttctgacacaacttgca
gctaaaacccttcctaaaggtcttcactgcctccccctgaggctagctaacgaatacttt
tcattggatcctgatcggcagcagttcccaaaccaacataaactcactaacccaaaactg
tatcattatgccttgttctcggataatatactagcaacagcagttgttgtaaattcaaca
gtgttaaatgccaagcatccttctgatcatgtcttccacatagtaactgacagactgaat
tatgctccaatgagaatgtggttcctttctaatcctcctggaaaggcaacaattgaagta
cagaacattggggagtttacatggctaaatgacagctacagtccagtgctcaaacaactt
gggtctcagtccatgattgattactactttggaacaaatcgtgcaaacccagattcaaat
ttgaaataccgaaatccaaaatatttgtcaatccttaatcatttgcgattttacttacct
gagatttatccaaagcttgacaagatggtctttcttgatgatgatatagtagtaaagaag
gatctgactggcctctggtcaatcaatatgaaggggaaggtaaatggtgctgtcgagact
tgtggagagagcttccatcgcttcgatcgttacctgaatttctcaaatcatgttattgcc
aagaattttgacccccatgcttgtggttgggcttttggaatgaatgtgtttgatctggct
gaatggaagaggcagaacataacccaaatctatcactcatggcagaagcttaatcaagac
agatcgctttggaaacttggcactctccctccaggtttgatcacattctggaacaagaca
ttccccctcagccggtcgtggcatgttcttggtctaggttacaacccccatgtaaacagc
agagacattgaacgtgccgcagtcatacattacaatggcaacatgaagccctggctagag
attggcctgcccaagttccaaagctactggtcaaagtatctagattatgaccaacctttc
ctgcaggaatgcaacatcaatccataa
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