Panicum virgatum (switchgrass): 120701424
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Entry
120701424 CDS
T07260
Name
(RefSeq) probable pectinesterase 48
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00040
Pentose and glucuronate interconversions
pvir01100
Metabolic pathways
Module
pvir_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120701424
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
120701424
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Motif
Pfam:
Pectinesterase
Motif
Other DBs
NCBI-GeneID:
120701424
NCBI-ProteinID:
XP_039841407
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Position
3K:complement(33914589..33916150)
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AA seq
380 aa
AA seq
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MVKNKQSLLLSLLLALVELVLLPAPSCQEMNFDFWVRKQTSNASKDAGCAKKDVALSSAD
ATMVRNSIDPSTQLNPEDGCYKTISESIANIPDGSTKRYILQLKGGTVFREKVFLPKNKP
FVTLMSDPNNPATIVWNDTATTPGRDGKLLGVDGSSTVSIESDYFIAYGIIFKNDAPLPK
KGENKGEATALRVLGTKITLYNCTIDGGQGALYDQSGLHYFKACIIRGTVDLIFGSAKSF
YEDNNIISVNKETLPMAPLQQQQRNNPIKAAPGEVGLSFKTCTIEGEGEQIYLGRLGMAC
VYLYTKIDKKLEPVISDGGNVQTVNRTGMIYYADFKSYGPGLDKALRSELSYAEARPYLG
TYYISGDTWIPFLPPAETWL
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagaataagcagtcactcctactttcccttctccttgcgttggttgagctggtg
ttgctaccagcaccatcatgccaggagatgaacttcgatttctgggtgagaaagcagaca
tctaatgccagcaaagatgcggggtgcgcaaagaaggacgttgcactatcctccgccgat
gctactatggtgagaaattctatcgatccctccacccaattgaatcctgaagatggctgt
tacaagaccattagcgaatccatcgccaacatccctgatggaagcaccaaaaggtacata
cttcagctgaagggtggtactgtgtttcgtgagaaggtcttccttccaaagaacaagcca
ttcgtcaccttaatgtccgaccccaacaatcctgctaccattgtttggaatgacacagca
accacaccaggaagggatggcaagctccttggtgtggatggcagtagcacggtgagcata
gagtctgactacttcattgcctatggcatcatcttcaaaaatgatgcaccgctgccgaag
aaaggggagaacaaaggtgaggcaacagcgttgcgggtgctcggaacaaagataacacta
tacaattgcaccatcgatggtgggcaaggtgctctatatgaccaaagtgggctgcactac
ttcaaggcttgcatcatcaggggaaccgtcgacttaatctttggctctgccaagtcattt
tatgaggacaacaacatcatttccgtgaacaaggaaactttgccaatggcgccactgcag
caacaacaacgcaataatcccatcaaggccgcccccggagaggtcggattatctttcaaa
acctgcacaattgagggagagggagaacaaatctatttaggcaggttgggtatggcttgt
gtctacttatacacaaagattgacaagaaactcgaacctgtaatctcagatggtgggaat
gtccagacggtcaacaggactgggatgatctactatgcagacttcaagagctacgggcct
ggccttgataaagcgctacgatcggaacttagttatgctgaggctaggccatatctcggg
acttactacatctcgggagacacatggatcccattcctaccaccagctgaaacatggttg
tag
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