KEGG   Panicum virgatum (switchgrass): 120701484
Entry
120701484         CDS       T07260                                 
Name
(RefSeq) riboflavin biosynthesis protein PYRR, chloroplastic-like
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00740  Riboflavin metabolism
pvir01100  Metabolic pathways
pvir01110  Biosynthesis of secondary metabolites
pvir01240  Biosynthesis of cofactors
Module
pvir_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    120701484
Enzymes [BR:pvir01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     120701484
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     120701484
SSDB
Motif
Pfam: RibD_C NADAR dCMP_cyt_deam_1 Antimicrobial14 Glyco_hydro_79n
Other DBs
NCBI-GeneID: 120701484
NCBI-ProteinID: XP_039841444
LinkDB
Position
1K:complement(28809968..28835805)
AA seq 623 aa
MPPPPLGVAAPAPAPAATAPSFIHLALSTRCHVAAPRAAAAASVPASHSSHARDALLLHR
AADVADRSAGLTSPHPNFGCVIARPRSETNSADSLVVGEGFLYAQGTPCAELLAAQEAGE
HARGATAYLNLEPGDCYGDSTAVRTLVQAGITRVVVGLRHPLKHLRGKAIQALLSEGIQV
DVVGEDLQNILFEEALKSCLIVNAPILYRAAFHVPFSVLKYAITADGKIAASSGHASWIS
GKASRGRVFELRGRSDAVIVGGNTVRFDDPRLTARHVEGHVPVRIVMSQSLNLPEEANLW
NVNDAYTIVATQRGARRDFQKKLARKGVEVVEFDMLNPRDVMSYCYDRGYLSVLWECGGT
LAASAISASVIHKVCVFMAPKIIGGLNAPTPVGELGMSQMTQAINLIDHSYEQIDRDMLM
SGYIQPIPDLSPVIPSMDEIPSVDPEISPYETNIISFYKTWDTFGAFSNFSSHPIHMPDE
NGDSFMWPTVEHYYQAHKFVGVDNPQARTIVHEIKLAKSPEEAARIGRTRQKQFPELVRI
DWETTKIDVMYRAIKHKFSTYPGLTNMLLSTAGSVLVEASPHDLFWGGGREGEGLNYLGR
LLMQLRSEIMGTFPASVEVGEAA
NT seq 1872 nt   +upstreamnt  +downstreamnt
atgccgccgccgccgctcggcgtcgccgctcccgctccggctccggctgccaccgcccct
tccttcatccacctcgccctcagcacgcgctgccacgtggccgccccacgtgcggccgcc
gccgcctccgtgcccgcttcccactcctcccacgcgcgtgacgccctcctcctccaccgc
gccgccgacgtggccgaccgctccgcggggctcacatccccgcaccccaacttcggttgc
gtcatcgcgcggccccggagcgagacaaacagcgccgattccttggtggtcggcgagggg
ttcctctacgcgcaggggacgccgtgcgccgagctcctcgccgcacaggaggccggcgag
cacgcgcgcggcgccacggcgtacctcaacctcgagcccggggactgctacggggatagc
accgccgtcagaacgctcgtccaggcaggaattacaagagttgtggtgggtcttaggcat
cccttgaagcacttgagagggaaggcaatccaagcattactaagtgaaggcattcaagtt
gatgttgttggggaggatctgcagaatatattgtttgaggaagctctgaagtcatgcctc
attgtaaatgctccaatactttacagagctgcttttcatgtccctttctctgttctgaag
tatgctattactgcagacggaaaaatagcggcaagtagtggacatgcttcttggatcagt
ggcaaagcatccagagggcgtgtatttgaattgcgtggcagaagtgacgctgttattgtt
ggtggaaatacagtgcgctttgatgatcctcgattaactgcaaggcatgttgaggggcac
gttccagttcgtatagtgatgtcacagtctcttaaccttcctgaggaagcaaatctatgg
aatgttaatgatgcctatacaattgttgcgactcagagaggtgctcggagagattttcaa
aagaagcttgctaggaagggtgttgaagtagtagaatttgacatgctgaatcctagagat
gttatgtcatattgttacgatcgtggttatctttctgtattatgggaatgtggtgggacc
ttagcagcttctgctatatctgcgagtgttattcataaggtctgtgtatttatggctcca
aaaataattgggggattaaatgcaccaacgccagttggtgaattagggatgagtcaaatg
acccaggcgattaatttaattgatcactcatacgagcagatcgacagggacatgctcatg
agtggatatatccaacccattcccgatctttcacctgttataccatctatggacgaaata
ccctcggttgatccagaaatttctccatatgaaacaaatattatttccttctataagact
tgggatacctttggggctttctctaacttttcttctcatccaattcacatgcctgatgaa
aatggagattctttcatgtggccaacagtggaacactattaccaggctcataaatttgtt
ggtgtcgacaatcctcaagcaagaaccattgtccatgaaataaagctggcaaagagtcct
gaagaggctgctagaataggaaggacccgacaaaagcagttccctgaactggtacggata
gactgggagactacaaaaattgatgtgatgtacagagctatcaaacacaaattttcaacc
taccctggtctgactaatatgttgttgtcgacggctggctcagttcttgttgaggcatcg
ccccatgatttattttggggcggtgggcgtgagggcgaaggtttgaattacttaggtaga
ttgctgatgcagctgagatcagagattatggggacgtttccagcaagtgtggaggtggga
gaggcagcttga

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